AMCG00014024


Basic Information

Item Value
gene id AMCG00014024
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49678320 ~ 49680362 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014024
ATGGAGCTGCTGGCGGGGGAAGacGTGCGCTTCATAACAGAGGAGACGTTTGATTTCAGCCTCGACTCGCCGTCAGACAGTCGGGAGCTGCAGGACGCttgcgaggaggaggaggtgttGGTGGGGCCAGTGCGGCTCGCCGGGCGCTGTGTGGCGAAGACTCTGGACCTCAACGTCCCAGAGGCGGAGCTTCTGCAGGGGGCCAGGGGGGCCGGGGCGCCGAGCTGGAGCCCCCTGAGCGCAGAGCGGCTGGAGCAGATATCCCTGGAGGCGAACCGTCTGGCCCGGCAACTGCGTCGCGGCGCGCGCAAAGAGAACGGCGGGGGGGCGGAGCCACGCTGCCCGCGCCGGGAGACCTATGTGGTGAGAGACAGTCCGGTGAAGGACCTGCTGCCCTCCATCTCCCCAGCACCCATGGCCGAGGGGCCCTCCTGCCCCGCTGCCCCCCCGAGCGGTCAGTCTCCGCCCCGCAGCGGGGCCACAGGCAAGGCCACAGGCAAGGCCACAGGCAGGGCCCAGCCTCCTCCCAGCAGACCGGCTCCCAGCAAGGCAGCTAAACCCCCTCTGCCACAGCCCAGGGCTGCCATGGTGACAGACACAGCTGGCCCCCGCTCTCGGGCCCCCCCTGCCAGACGCCCTGGCGCGCTCTCCCCCAGCTTCACCCGGGCACCCCTCATTCCGCCCCGCAGCCCCCCAACCCCGGCCACCACGCCCCCCACGGCGCCGGGCAGCTCAGACACGGAGGGCAAGCAGGCCCGGCCGAACCCCCTGAATTCACCCCGACCCCAGCTGGAAGACGGGAAGAAGCCCCCCAGGAAGACGAGCGCCGCCGCCGATGCCCCCCAAGGGGCTCTCGAATCCTCAGCCATGAGGAAACCGGCCCCCAGCAGCGCCCCCCACCCCTACCAGTCGGAGCTGTGCAGGAACCCGGGTGCAGCCAAGAGATGCGCCCCACCCGGACCGGACCGGCGTCCCCAGGCCCGGAGAACCGCCATCCCGGCTCTGCGGCCGACCCCCCCCTCCGGCATCCCCAAACATGGCGGCAGGGCGGCCACACTGGGGCCCCTGCCCCCCCCGATGGCGGCACAGACAGGTGAGTCTCCTGGGGCGGGTGGGGGGGCTCCAAGTGCAGCTGCGTGTCGACGCCTGCCCGGCCCTGGCCCCGGCCTCATGCCCCATCTGTGTTTCAGCTGCCCCCCCCCGGGCCTCCCAGCTGCCTACCTACACCGGACGGAGCCGCCTGGTGCCCCCAAGGGCCCTGCCCAGAGTGGGGGGGCCACTGTGAGCACAGGCTCCGGGGCTGACGACGCTCCTGTgaagacccccaccccccaggccCATCTGCACAGACTGGGGACAGATGGACGGACGCAGCTGGTCTTCCTGCTCTTGGCCGTCTGGATGCGCAGGAGCTTGGCCAAAACCGTGCCCCCACGGCAGCAGGCCGTGTTCATCGCCGGGCACCACCCCCCAGCCCAGGCTGTTGCAATGTGCGAGTGA

Function

GO: NA

KEGG:

id description
K21443 PSRC1; proline/serine-rich coiled-coil protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014024 True 1500 mRNA 0.71 4 49678320 49680362

Neighbor

gene id symbol gene type direction distance location
AMCG00014023 NA coding downstream 71126 49595783 ~ 49607194 (-)
AMCG00014012 NA coding downstream 119560 49557804 ~ 49558760 (-)
AMCG00014011 NA coding downstream 155700 49505466 ~ 49522620 (-)
AMCG00014006 NA coding downstream 191878 49482042 ~ 49486442 (-)
AMCG00014008 NA coding downstream 208188 49464439 ~ 49470132 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding upstream 9317 49689679 ~ 49694164 (-)
AMCG00014035 NA coding upstream 17499 49697861 ~ 49703373 (-)
AMCG00014036 NA coding upstream 70106 49750468 ~ 49757241 (-)
AMCG00014046 NA coding upstream 102910 49783272 ~ 49788746 (-)
AMCG00014048 NA coding upstream 110981 49791343 ~ 49794766 (-)
G48494 NA non-coding downstream 2570 49663092 ~ 49675750 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding downstream 50553 49623810 ~ 49627767 (-)
G48437 NA non-coding downstream 55129 49622097 ~ 49623191 (-)
G48433 NA non-coding downstream 59365 49618277 ~ 49618955 (-)
G48430 NA non-coding downstream 64346 49613696 ~ 49613974 (-)
G48508 NA non-coding upstream 45373 49725735 ~ 49726249 (-)
G48509 NA non-coding upstream 45926 49726288 ~ 49727007 (-)
G48512 NA non-coding upstream 53547 49733909 ~ 49734172 (-)
G48517 NA non-coding upstream 68227 49748589 ~ 49749282 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 179690 49494727 ~ 49498630 (-)
G48373 NA other downstream 193553 49484500 ~ 49484767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 857164 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 1198743 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 1303224 48366043 ~ 48375096 (-)
G48506 NA other upstream 39403 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 41384 49721746 ~ 49724237 (-)
G48510 NA other upstream 48142 49728504 ~ 49729055 (-)
G48516 NA other upstream 64584 49744946 ~ 49747551 (-)
AMCG00014043 tmcc2 other upstream 183960 49864322 ~ 49930152 (-)

Expression


Co-expression Network