AMCG00014027


Basic Information

Item Value
gene id AMCG00014027
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49695266 ~ 49697020 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014027
ATGGACCTCGTGTGTCTGGAAGACTGCCGGCTCCAGCCCAGCCCTCCCCGCCGCCACTGCCCGGCGGCGGTGCAGCCCGTGGCGGTCGTGCGGGCCCACACGGACCCGGCCCTGACCCGGGACGCCCGGGTGCTGCGCAACCTGCTCCTGCTGGAGGAGAAGTCGCCGCCCTGTCACTCGTACTTCGCCCGCGTCCAGACCGACATCCAGCCGCACATGCGCAAGATCCTGGCCGAATGGATGCTACAGGTGTGTGAGGAGCAGAAGTGTGAGGAAGAGGTGTTCCCTCTGGCCATGCGCTACCTGGACCGCTACCTGTCCTCCTTCGCCGTGTCCCGGACCCGGCTGCAGCTGCTGGGCGCCGTGTGCATGCTGCTGTCCTCCAAGCTGCGCGACACGGTGCCCCTGACCGCCGTGCAGCTCTGCGCCTTCACAGACCACGCCGTGACCCTGCGCCAGCTGCTGGTAACCACCTGGGGCTGGGGCTGTTCGAGGGACTGGGAGCTAGTGGTGGTGTCCCGGCTGCGCTGGGACCTGGCGCTGGTGGTGCCCTCGGACTTCCTGGAGCTGATCCTGCAGCGGCTGCCCGACCTGCCGGCAGCTCAACACGGCCTGGTGCGCAAACACACCCATATCTTCATCGCACTGTGTGCCACGGAGCTGAAGTTCTCCATGTACCCGCCCTCCATGATCGCCTCGGCCAGCGTGGGAGCGGCCGTCCGTGGCCTGCGGCTGCCCGACTCTGCGCTGGACAGTGATGCGCTGATGGAGCTGCTGGCCAGGGTCACTGGCTCGGACGTGGACTGCCTGCGCTCGTGTCTGGAGCAGATCGAAGATGCTCTGAAGCAGCACCTGCCGCCGGCCGCCCCACCCGAGCCCCGCTGCCCCAGCTCCCCCCAGCCCAGCCCCGCCGGGACCCCCACCGATGTGCGTGATGTGCGCCTGACGCCCCCCTGCCTCGCGCCGGCCCCGTGA

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process

KEGG:

id description
K10151 CCND2; G1/S-specific cyclin-D2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014027 True 975 mRNA 0.69 5 49695266 49697020

Neighbor

gene id symbol gene type direction distance location
AMCG00014019 NA coding upstream 6609 49686808 ~ 49688657 (+)
AMCG00014014 ppil1,LOC107736561,LOC107667353 coding upstream 12846 49680521 ~ 49682420 (+)
AMCG00014018 celsr2,LOC106565652 coding upstream 21515 49653648 ~ 49673751 (+)
AMCG00014020 NA coding upstream 42104 49647798 ~ 49653162 (+)
AMCG00014025 celsr2 coding upstream 61399 49629809 ~ 49633867 (+)
AMCG00014026 med20 coding downstream 6691 49703711 ~ 49706258 (+)
AMCG00014029 usp49,LOC106583088 coding downstream 20494 49717514 ~ 49728992 (+)
AMCG00014030 NA coding downstream 39394 49736414 ~ 49738159 (+)
AMCG00014037 NA coding downstream 73573 49770593 ~ 49771894 (+)
AMCG00014031 NA coding downstream 75141 49772161 ~ 49772784 (+)
G48449 NA non-coding upstream 15390 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 210307 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 238568 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 241394 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 583183 49068105 ~ 49112083 (+)
G48460 NA non-coding downstream 32651 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 56564 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 96186 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 160460 49857480 ~ 49857687 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 174086 49871106 ~ 49873377 (+)
G48451 NA other upstream 2905 49689672 ~ 49692361 (+)
AMCG00014021 NA other upstream 75239 49613701 ~ 49620027 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 149931 49538054 ~ 49545335 (+)
AMCG00013996 NA other upstream 346665 49345097 ~ 49348601 (+)
G48231 NA other upstream 594808 49076742 ~ 49100458 (+)
G48453 NA other downstream 1600 49698620 ~ 49699622 (+)
G48454 NA other downstream 4231 49701251 ~ 49701943 (+)
G48455 NA other downstream 6058 49703078 ~ 49703528 (+)
AMCG00014032 usp49 other downstream 9823 49706843 ~ 49717428 (+)
G48457 NA other downstream 26006 49723026 ~ 49723876 (+)

Expression


Co-expression Network