AMCG00014028


Basic Information

Item Value
gene id AMCG00014028
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49739312 ~ 49749169 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014028
GGGAGAGGGCGGGAGGGCTCTGACGCGTGTCGGGGGCAGGAGGAGTGTAAGGGGTCTCGACGGGCAGGGGTGTCTCTCAGCACCGGTGTGAGTCTGAGCTGTAATTCACACAGGCCGGCGTCACTGCCGGCTGCAGGGTTGGCCCCCGGGGGCCCGTCACAGGGGGCTCAatgtccgcagctgTGCGTAGCTGTGCGTGCAGTGTTGCGTGCTTTAGCCCCGCCCCCGACGCAGCGTGCCCGCTTTAACCCCGCCCCCACGCGGCGCGTTACACAAGCTGCTGCGGCGCTGCTGGGGGTCGGACGGTCGCTGAGCTGCTGCTGTAAAGtgatGTGGGCCCATGCTCTGGGGTTCAGTGCGCTGCCCCACCTGGGGGGCTTCGTGGGCTGGCTGTACACACGCCGAGCGGTACCCACCTGGTACGAGACGCTGAAGAAGCCGTCCTGGCGCCCCCCCAATCGCGCCTTCCCCATTGTGTGGACAACACTGTACGGCTCATACCTGGTGTGGCGAGAACTGGGGGGCTTCACCGAGGAGGCCAAGCTGCCGCTGGGGCTGTACGCCACACAGCTGGCGCTCAACTGGGCCTGGACGCCCATCTTCTTCGGAGCTCACAAGATAAAGCTGGCCCTGGCGGAGCTGGTGCTGCTGACGGGCACAGTGGGCGCCACGCTGGTGACCTGGTACCCAGTGAACCGTGCGGCCGCCCTGCTCATGGTGCCCTACCTGCTGTGGCTGTGTCTGGCCACCAGCCTCAACTACTGCATCTGCAGGGACAACGATGAGGACGACAAGGAGGAGTAGCGAGGGCGAGGGGAGGCGCTGGGGGGACgagaatgaaaacacacacgcagacactcACCATTCCTCGTCTGCTCGTCTCTCTATAGCCTCTACTATTATATTTTTGGgg
>TU60518
GCTTTAACCCCGCCCCCACGCGGCGCGTTACACAAGCTGCTGCGGCGCTGCTGGGGGTCGGACGGTCGCTGAGCTGCTGCTGTAAAGtgatGTGGGCCCATGCTCTGGGGTTCAGTGCGCTGCCCCACCTGGGGGGCTTCGTGGGCTGGCTGTACACACGCCGAGCGGTACCCACCTGGTACGAGACGCTGAAGAAGCCGTCCTGGCGCCCCCCCAATCGCGCCTTCCCCATTGTGTGGACAACACTGTACACCAGCATGGGGTACGGCTCATACCTGGTGTGGCGANN

Function

GO:

id name namespace
GO:0060319 primitive erythrocyte differentiation biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K05770 TSPO, BZRP; translocator protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014028 True 913 mRNA 0.65 6 49739312 49749169
TU60518 False 289 lncRNA 0.65 3 49746515 49747587

Neighbor

gene id symbol gene type direction distance location
AMCG00014030 NA coding upstream 1153 49736414 ~ 49738159 (+)
AMCG00014029 usp49,LOC106583088 coding upstream 10320 49717514 ~ 49728992 (+)
AMCG00014026 med20 coding upstream 33054 49703711 ~ 49706258 (+)
AMCG00014027 NA coding upstream 42292 49695266 ~ 49697020 (+)
AMCG00014019 NA coding upstream 50655 49686808 ~ 49688657 (+)
AMCG00014037 NA coding downstream 21424 49770593 ~ 49771894 (+)
AMCG00014031 NA coding downstream 22992 49772161 ~ 49772784 (+)
AMCG00014040 NA coding downstream 88256 49837425 ~ 49842315 (+)
AMCG00014050 NA coding downstream 161389 49910558 ~ 49916242 (+)
AMCG00014039 NA coding downstream 169458 49918627 ~ 49925703 (+)
G48460 NA non-coding upstream 7512 49729671 ~ 49731800 (+)
G48449 NA non-coding upstream 59436 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 254353 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 282614 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 285440 49453033 ~ 49453872 (+)
G48467 NA non-coding downstream 4415 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 44037 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 108311 49857480 ~ 49857687 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 121937 49871106 ~ 49873377 (+)
G48457 NA other upstream 15436 49723026 ~ 49723876 (+)
AMCG00014032 usp49 other upstream 21884 49706843 ~ 49717428 (+)
G48455 NA other upstream 35784 49703078 ~ 49703528 (+)
G48454 NA other upstream 37369 49701251 ~ 49701943 (+)
G48453 NA other upstream 39690 49698620 ~ 49699622 (+)
AMCG00014038 NA other downstream 58979 49808148 ~ 49813985 (+)
G48566 NA other downstream 164760 49913929 ~ 49914542 (+)
G48578 NA other downstream 187646 49936815 ~ 49948082 (+)
G48583 NA other downstream 207023 49956192 ~ 49956729 (+)

Expression


Co-expression Network