AMCG00014038


Basic Information

Item Value
gene id AMCG00014038
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49808148 ~ 49813985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014038
tatatatatataaagtatatcaAACAAGCACTGGTGCTAAAGTTACGGTACAGTAAGGAACAAGTTATTCTAGTGTTTGCCGAGGGTGAACAGAAGGGAGTGTCAAGGTGGACGCCTGGCAGGGTTGTGGACAGCACTGAGAGACGCTGCAGGTCCCACAGATCAGAGCGGGCCGGCTCGGCCACAGCGTCTCACCTCCAGCAGCAGAGACCAAAACAACACAACCTTAAGACGGTTTGCTTTCTTCTggaggaaataaatataatctacagCTACAGACGGTGTGGCCTTGGTGCTCTGCTCCTCAAAGCTCATCCTCTGTCCTGAAGGGGGGCGGGACAGGGAGGCTCCAGGGACAACACACccctgtgtgtcactgtgacaGAGGGCTAGTGTTGAAAGCACGAAGGAAGCCACAGGGAGGAATCTATGGATGGGCTCGGCCACTCAGACCCAGCGCCTGTTATTGAGTTAGGGTGAGGCTTCACTACATTAACTGAATCTAGgaatgttttaatctttttaagaGTTATTGCACAAATGGCTCTCTGTGTTTCCAGGAATGGTTTTCTAATGAAAACACATTCATCACTTTAGATCTGACCTTCTTATCACTGCCCTTAATGTGACTTTGGATATTTATAATACTGGGAAACCATTAAGTGTATTATCCTTGTAATTAGACTGATTTGTATCAagattttggaaaaataaacgCAATAATCTAAAACAATTATTGAAAGAGTGGCGATTAGTGCCAGAGTGCAGATTATGCCACCTGGGGAACAGTAAACAGGGAGCGGTCATTGCACGTGGAGCCTCTGCTCAGAACTGCAGCCGCCTGTCCCTTACAGAGCGCTGAGATGCCCCCAGTGGCACTAAAGTGGCAATACTTGGATCTGACAACATGTTGACATTCACTGAAAGGGGATGAGCAGTAAGTCACCGCACTGCACCCAGGCTGATGGGAATTCACACTCAGCACAGACCCTGCGCTGCAGCGCTCTGCCCGTCCAGGACCTGCCAGGGCTCTCGCCTCGAAGGGTCCAACACAAACCTACACCACAACAGAATACCAAGGTAcccaaggaaaaaaacaaacaaacatctgtgaaataaatactCGTACTTGCCAACACTTCACTCTCGTGGAAATAAAGACAATCCTCGGACTGAAGCAGCACATGGCACATCGTTATAAAGCACTTGTACCTACAGAAGCCCACAGTGGCGTTGTCAAGTACAAATGATAGGGATGCGCTTACCTAGGCAAGTGCACAACCAGCACACACTGGGAGCAGAAGACTGGGCCCAGACCGGACCAATCAGGGCATCAGATGACCAccctccctctcctgctctcGCCCCGGCCGTGTGCCCACTCTTCTGCCCCAAGCCTCCCTTCCGATACATTCAAAGAGGTGTTTGACATTGTGGTGCGTGACACCCTGAGCTCCCAGCCCCCCTGTGAACACCCGAAGAGTCCCAGCGATATAAGACTTGCACAGCTTAAAGAATTTCTCACAGAAGCACAGCGACCGCGGGACAGACGGACGGACGAGACGAGCACACGAGGCCAGTATTTACAGCTTACTCGAACAGCTTAGTACCTACGAGAACATGCTtctgtacaaaaaataattaacatcatTAGAAAATATATCTAGGTAAAGTAAAGTCAAGTGCatgcacgagagagagagagagagagagggggactgTAAACATTAACCACCTGACAAAGCAGTCTCTGCAGAACAACACAGTTAATACAGGTGTCTGGGGATGAGAGCAGAACTAGAGGAGGAATAAAACTCTCGGGCAGCACTGGTAACAAATATCCCCGCAGTGGAATATGAAGCAGAAACCCTGACCGGAGCAACTCGTGAGGAGCGCCGAGCGGAGGATGGGAAGGACACGGACACACGCATGGCATTTTATACACTTCCCACTCCGGGAAAAAGTTACAGATTAAATCCATTTTGGATTACAATAGTCAATAAATCATCatgtagttaaataaataaaaaaaaaaatgcagaagagTATTGCATAACAGAAACGGTGTACATGAGGACTGTACAAGCCTGGCTTCCCCAGGCAGCAACGTTAGCGATGAAGCAGCAGGCACGCCTCGAGCCACAGCCTGTCGAGGCAACTAAAACTTCCACATGGCATGTCACAAAGCAAACCGCAACACCGGGAATATCTGCTACCAGCTGACGAAGTGAGGCGGGACAGAGGAACAGCGAACTCCTTCAGGAAGGAGGTGATGCGTCTTGGACCCGCAGAGACCAGTCCGGCACTGGAGACACTTCCCACCGTTTAGAAACAGATCAGCCTCCTAGAAGACTCTGACCTGTCGAGTTTGGCAAATGGAAAGTCTCAGAATTTTGGCACAGCATCTCCCtaaaccccccccacccactgcTAACCACAAGCAAGGGTCTGCAGCCGAGACCCCACTCCCACCCGCGTGTCTCTGCACACTTCACCCATCAGGGGCTGTGGTCTTGGCGATGAGGTCGTGTTCTTCTCTGGGTGGGAGTGGAaggggagggacagagaagTGGAAATGTGTTCTGGCGGTCTCTCCTGAAGCCCCCTACACCGCCCCTTCCCCGGGCCTGGTGAGCCCATCAGGACAGGCCCATTTTAAGACGAGAGTGGAGGTTAGCAGGATCCCCAGGACTCGACACCGGGTCTCTGCTCACCTCCCATCTCACAATTGCTTggcaaatacatatatttattccaATAAAAGCATAAACATAATATGAGAAACACTGTGTTGCTGACAAACAGTAACACGTTGGCACTTTGACAGGATGGGACATTGTCTGCCAGGGCAACAGGTACCGTTGTGTGCAAAGAATCAGGCCACTGACACGACTACTGCCGCACAACGCACCCCCTGTTCGGCACGCCTTGCGACATGCAAGACTGCTCCAATATCAGATATCTCCGCGATCCCATGTATACATACAGTCCATGTGTAAACACTCAATTATTTTCCTTCGTTTTCTTCCTCATGAAGATGAAAGGCCACGTGCCCCCCCAGCTCTGAGGGTGGGGCTGCCGAGAGGCGCGGCACAGCGACACGTCACCACGAACGCATGGCAACAAAATCTAACAAAGATACAAAATGGGTCCTGAGCTTTCTCAGCTGGCGAGAAGCTGGAGCAAACTGTGGTCAGATCAACAGCAAGAGACCTGCTGGTGCCTCCCAGAGCATCAGCTGGCCTCCTCTGCGACAGTGTCACATCCATAGCAGCAGTGTCAACACGCGAGGGTTTCTGTACACATCTggatacacaaacacacgcacgcacgcacgcatgcacgcacgcatgcacacacacacacacacacaaacacacacacagacacgcagacagCTACACATACGGTGTATGTATAGATGTCAGCGGTACCAATTTACTCAAGTTTAGACCCCAAGCTAAGTAAACACAGGCAGGAGGCCGCGGGGGGCGGACCCTGGAGGTACGCGGCCCCCCGCCTCTGTAAGGGTCTCTCTTCAGTCTCGGTCCCACTGTGCAGACAGCGCTGCCCCCACACTCACACTAATCCGGGGCTTCCAGCAGGGTGGCATTGAAATGAAGGCTGGTTGTTTGGGGCCAATCAGCAGGCAGTATGAGGAATGACATCATGACCGGCAGGTTCTGAGCACGGGTGAGAATTCTCCGACTCATTTGGCACGAGAATCCCTAAACGGGACCAGAGCTGACCCCCCACCCGGGGAAGTGTAGTAGGTCATAGACTGAATGGAGAGGAGGGGCCCACAGAGACCTTTAGTGACCCACGCAGGTGGCTCAGTGCACCGACTCGATCGCAGTCCTGTAAACAGCTTCTTCCAAGCGATTCTCCACATTTACAAACACCTCCAAACACTCCAGAACACGCATCGTAATTTCCCGTTTGGTCGTTTTGTGAAAAGGTAGGAAAATATAAACAACCTGCACAAAACCTCATGAAAATGgcagaaaacatacaaattccTGTTAGCAGTCAGTCAGCGAGGGGTCAAAGGACAAAGCAATCTCTAAACCTCTGGAGGTCGGGGGTTTGGGAGAGTAATTATTAAGGACTAGAGAAATCACCTCTGCCAAGATGACATTCAGAGTTAAATTTTCCCATTATGCCCTGGGTGAAACAGAAGGGAAATCCCTCTTCACAGTTAAGACGTTATGATGATCGGTTCTTTTTGGATTCAGTGTTTAGCCCTCACATCCCAGTGCTGTCGAACAGCACATGAACTCACCACGAACACACACTGTGAAGAGACTCCCTCACAGGCCAGACGCGTTGAAGCCTCGTGCCTCTTCCCTTTGTAGCGCTCAGTAAAGAGAAGCTGCTGTCAGGCTGAGCCGCGAGGCGAGATGACAGACGCAGGATCCTCTCTGGCGATCTCCGCCTGGCACAGCGGCAGGACTGGGGCTCAGGGGGCCCTGACACCCACCGGCCCTTGAAACCCGGCGGCAGCAGCTGGGGCTGGGCATGTCCGGCTCTGCCATCACAGCTCGTCTGTGTCTACTGGTGCAAATGCATGAGTGTGAGGAGTGTGAAaaagagtgtgagagagagagggagtgtgtgagaACAGGGCCGGCTGCGGGGCTGCGGGTCACACATGCGCCGACGGTCGGGGCGGCATCGGCACACCAGGCCATCAGCGTGACGACAACCCTGCTGCTCACAGGCAACTCTGAGGAACTCGATCAACACGACCCCCGTCCTCCTCCTTTGGCACAAACAGCAGCGTCGCAGGACCCTCGACCACATGCATCCCAGTCCGGGGGCAGaagatctgctgtatttttggGGATGAGAATGAACTCACACTACAAAACCCGCCAGGCCGGGACAGCAGTGCAGGAGCGAGGCGGGGCTCTCAGGGCGGAGTCGCCCACACAGAGGATCACGCTTCTCTCCGCGGGCCGCGGCCCCACGCTTGCCCGCCAGGGGCCCAGCCACAAGGGCCCTGCGGTCCTGTGTCTCGATCCCTTCCTGCGGCGGAGTCTCAGTAATGGGGGTGCCCCCCCAACTGCCTCTCAGGGACGCGGAGGCACGGGGGGGATGGGCAGGAGGATGGGGGGACATGGGGGGGCGCACACTGCTGCTGACTGGTGA
>TU60552
ttactgtcttttttgtctttattcaaTATACTTTTCAGTGCACATTAATTAAGATACAGCATTCCTGTCCATGTTTCACTGGTCTGGCTTTGCTTGAGTACAGTTCCATACGGAGAGTAGAAACAGCTATGAAATGAGGCTAGCTCCAAACTAGAACaagtacagtgtatatatatttatatatgtatattataatacagtTATCCGATTTccataaaacagaaacatcaagagaaattaaattttaaaaaataaaacaaaattaaataaaaaatctcgcAATCCCTCAATGGGAATTTCCAGCTTAACAACTTGaaacatttctataaatattcagtatttcattatatatatatatatatatatatatatatataaagtatatcaAACAAGCACTGGTGCTAAAGTTACGGTACAGTAAGGAACAAGTTATTCTAGTGTTTGCCGAGGGTGAACAGAAGGGAGTGTCAAGGTGGACGCCTGGCAGGGTTGTGGACAGCACTGAGAGACGCTGCAGGTCCCACAGATCAGAGCGGGCCGGCTCGGCCACAGCGTCTCACCTCCAGCAGCAGAGACCAAAACAACACAACCTTAAGACGGTTTGCTTTCTTCTggaggaaataaatataatctacagCTACAGACGGTGTGGCCTTGGTGCTCTGCTCCTCAAAGCTCATCCTCTGTCCTGAAGGGGGGCGGGACAGGGAGGCTCCAGGGACAACACACccctgtgtgtcactgtgacaGAGGGCTAGTGTTGAAAGCACGAAGGAAGCCACAGGGAGGAATCTATGGATGGGCTCGGCCACTCAGACCCAGCGCCTGTTATTGAGTTAGGGTGAGGCTTCACTACATTAACTGAATCTAGgaatgttttaatctttttaagaGTTATTGCACAAATGGCTCTCTGTGTTTCCAGGAATGGTTTTCTAATGAAAACACATTCATCACTTTAGATCTGACCTTCTTATCACTGCCCTTAATGTGACTTTGGATATTTATAATACTGGGAAACCATTAAGTGTATTATCCTTGTAATTAGACTGATTTGTATCAagattttggaaaaataaacgCAATAATCTAAAACAATTATTGAAAGAGTGGCGATTAGTGCCAGAGTGCAGATTATGCCACCTGGGGAACAGTAAACAGGGAGCGGTCATTGCACGTGGAGCCTCTGCTCAGAACTGCAGCCGCCTGTCCCTTACAGAGCGCTGAGATGCCCCCAGTGGCACTAAAGTGGCAATACTTGGATCTGACAACATGTTGACATTCACTGAAAGGGGATGAGCAGTAAGTCACCGCACTGCACCCAGGCTGATGGGAATTCACACTCAGCACAGACCCTGCGCTGCAGCGCTCTGCCCGTCCAGGACCTGCCAGGGCTCTCGCCTCGAAGGGTCCAACACAAACCTACACCACAACAGAATACCAAGGTAcccaaggaaaaaaacaaacaaacatctgtgaaataaatactCGTACTTGCCAACACTTCACTCTCGTGGAAATAAAGACAATCCTCGGACTGAAGCAGCACATGGCACATCGTTATAAAGCACTTGTACCTACAGAAGCCCACAGTGGCGTTGTCAAGTACAAATGATAGGGATGCGCTTACCTAGGCAAGTGCACAACCAGCACACACTGGGAGCAGAAGACTGGGCCCAGACCGGACCAATCAGGGCATCAGATGACCAccctccctctcctgctctcGCCCCGGCCGTGTGCCCACTCTTCTGCCCCAAGCCTCCCTTCCGATACATTCAAAGAGGTGTTTGACATTGTGGTGCGTGACACCCTGAGCTCCCAGCCCCCCTGTGAACACCCGAAGAGTCCCAGCGATATAAGACTTGCACAGCTTAAAGAATTTCTCACAGAAGCACAGCGACCGCGGGACAGACGGACGGACGAGACGAGCACACGAGGCCAGTATTTACAGCTTACTCGAACAGCTTAGTACCTACGAGAACATGCTtctgtacaaaaaataattaacatcatTAGAAAATATATCTAGGTAAAGTAAAGTCAAGTGCatgcacgagagagagagagagagagagggggactgTAAACATTAACCACCTGACAAAGCAGTCTCTGCAGAACAACACAGTTAATACAGGTGTCTGGGGATGAGAGCAGAACTAGAGGAGGAATAAAACTCTCGGGCAGCACTGGTAACAAATATCCCCGCAGTGGAATATGAAGCAGAAACCCTGACCGGAGCAACTCGTGAGGAGCGCCGAGCGGAGGATGGGAAGGACACGGACACACGCATGGCATTTTATACACTTCCCACTCCGGGAAAAAGTTACAGATTAAATCCATTTTGGATTACAATAGTCAATAAATCATCatgtagttaaataaataaaaaaaaaaatgcagaagagTATTGCATAACAGAAACGGTGTACATGAGGACTGTACAAGCCTGGCTTCCCCAGGCAGCAACGTTAGCGATGAAGCAGCAGGCACGCCTCGAGCCACAGCCTGTCGAGGCAACTAAAACTTCCACATGGCATGTCACAAAGCAAACCGCAACACCGGGAATATCTGCTACCAGCTGACGAAGTGAGGCGGGACAGAGGAACAGCGAACTCCTTCAGGAAGGAGGTGATGCGTCTTGGACCCGCAGAGACCAGTCCGGCACTGGAGACACTTCCCACCGTTTAGAAACAGATCAGCCTCCTAGAAGACTCTGACCTGTCGAGTTTGGCAAATGGAAAGTCTCAGAATTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014038 True 5151 mRNA 0.53 3 49808571 49813985
TU60552 False 2761 lncRNA 0.46 2 49808148 49810966

Neighbor

gene id symbol gene type direction distance location
AMCG00014031 NA coding upstream 35364 49772161 ~ 49772784 (+)
AMCG00014037 NA coding upstream 36254 49770593 ~ 49771894 (+)
AMCG00014030 NA coding upstream 69989 49736414 ~ 49738159 (+)
AMCG00014029 usp49,LOC106583088 coding upstream 79156 49717514 ~ 49728992 (+)
AMCG00014026 med20 coding upstream 101890 49703711 ~ 49706258 (+)
AMCG00014040 NA coding downstream 23440 49837425 ~ 49842315 (+)
AMCG00014050 NA coding downstream 96573 49910558 ~ 49916242 (+)
AMCG00014039 NA coding downstream 104642 49918627 ~ 49925703 (+)
AMCG00014049 NA coding downstream 113241 49927226 ~ 49929020 (+)
G48479 NA non-coding upstream 14498 49793206 ~ 49793650 (+)
G48467 NA non-coding upstream 54121 49753584 ~ 49754027 (+)
G48460 NA non-coding upstream 76348 49729671 ~ 49731800 (+)
G48449 NA non-coding upstream 128272 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 323189 49484489 ~ 49484959 (+)
G48552 NA non-coding downstream 43495 49857480 ~ 49857687 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 57121 49871106 ~ 49873377 (+)
AMCG00014028 NA other upstream 58979 49739312 ~ 49749169 (+)
G48464 NA other upstream 65634 49741852 ~ 49742514 (+)
G48457 NA other upstream 84272 49723026 ~ 49723876 (+)
AMCG00014032 usp49 other upstream 90720 49706843 ~ 49717428 (+)
G48455 NA other upstream 104620 49703078 ~ 49703528 (+)
G48566 NA other downstream 99944 49913929 ~ 49914542 (+)
G48578 NA other downstream 122830 49936815 ~ 49948082 (+)
G48583 NA other downstream 142207 49956192 ~ 49956729 (+)

Expression


Co-expression Network