AMCG00014039


Basic Information

Item Value
gene id AMCG00014039
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49918627 ~ 49925703 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014039
CTGGCCCAGTCCAGTCCGCTCCCCAGCTCACACGTCTCGCCCCCCCAGGATACCAGGATGTCACGCGGCAAGGTGATCAGCTGTCTGCTGGTGGTGAGCGTGGTGGCCATGCTGGCCGAGCAGACGGAGGGCTTCATCAGCTTCATCAGTCCCGGAGACATGAGGAGGATGATGGAGCAGGAGAAAGGGAGAGCTGGGAAGAAGTCGCTGGAAGTGGAGCAGAGGTCCGAAGAGAGGGAGTCGGGGGAGCTGGCCAGCCCAGACTGGTACAGACAGAAGGACACGGCCAAGgGAGCTCCCCTGGAGATCGGGGTGCGGTTGAGTCCCCAGCAGCTGGACAGGCTGGCCCCGGTGCTGGGGGAGATTCTGCACGAGATGCTGGCAGAGGGGAACAAAGTTTTACAGACACTGATCAATAACAAGGtccagggagggagagggggccgTGTGCGCGCTTGCTCTCGATGGCCCTCCCCAACATGGCGCCGCGACCCGCCCGGCCGAGTCCAGGCGCACTTCCGGCAGCACTCCAGCATGGCGTCGCTGTCGGACGAGGAGCTGCGGCGCGGCCTGCGGGCGCTGGGCTTCTGCCCGGGACCCATCTCTGACAGCACCCGCAAGCTGTACCTCAACAAGCTGCGCAAGCTGCGCGCCACCGACCGCAACCGGGTGCAGCTGCTGCGGAGCCAGGGCCCGGGCAACAAGCACCCTCCCCAGGCCTCCCTGCAGCGCCACCGGCACGACAGCCACCGACAGCGGACGAGCAGCGCCAGCCCCCGCCACCGGACCGCCAGCTTTCAACGGGACTCCGAGGAGTCTGACGAGGAGGACGACGACGAGTACGGGTACCGGGAGGAGACCCGGTACCGGCAGCTGGCGGACAGCGGCAGCTCGCTGAAGAAGGGGGACGCTCAGCGGCGCTGCGACAGCACGGCGCGGTGGAACCGGTTCGTGGAGCGGCAGCTGTCCCGGGCGCTGCTGGCCTGCACCGTAGCGCTGTCCGTCGTGCTGCTCTGGCTGGTGTACGTGAAGACCGTGGGCCTGGGCCAGCCCGCCGAGCCCGGCAGCAACATCCTGTTGCTGCCGATGGACTGCAAAGGGAAGAGCGACACAtaCTGCAGGGCCGAGGAGAAGCGGATGGAGCTGCAGCTGCTGTCAGAGCTCTACAGCTTCCTGGCCAAGGTGGCAGgtGATTTTGAATGTGGGAACCCATCACAGTTCAAGAGCAGATGTGTCTCCATTCCAGAGGTTGAGAGTTACTTGGCAACTATAAACAAAGGTTACCCCAGCAGGCTGGCAGAGGCCCTGCAGTGGATTCACCAGAGCGACACAGACCTGGGCATCTGGCTGGTGGGCAAGGACCCCCAGAGGGCACTGGTGTCGTTGCAGGGGCTGAGCTGCGTGCAGTCAACCAGTCCAGCCCTCAGTCTGGGTTGCCGCCTGCGACTGGCCGTGCATGCCGCCATCCTCAAGAGCCTCATCTTCATCCTGGCGCTGGCCGTGATGTGGGGAGTCCTGGTGCTGCTCCGGTACCGCTGGCGGCGTctgcaggaggaggagcaggcCATGTACGAGCTGGTGCGCCGTATCATCGCGGCGGTCCGGGAGCACTATAAGGACTGGGACCAGGGGCTGGAGCCCATCCCCTACCTGCCCATCCCTCACGTCCGGGACGCCCTGCTGCCGCCGCAGAACAGGTCCGCAGCCCTCTGTCCCACAGGGTGGAGCTCCCTTCCAGAGTCGCGGATTCGCACCGAGAGCCACCGCGTGGCCGGGGAGGACTTCCTGGTGTGGCGATGGACGCAGCCGGCCGAGCTGTCTGACTCCAGCTAA

Function

GO: NA

KEGG:

id description
K24080 LEMD2; LEM domain-contaning protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014039 True 1833 mRNA 0.66 12 49918627 49925703

Neighbor

gene id symbol gene type direction distance location
AMCG00014050 NA coding upstream 2385 49910558 ~ 49916242 (+)
AMCG00014040 NA coding upstream 76312 49837425 ~ 49842315 (+)
AMCG00014031 NA coding upstream 145843 49772161 ~ 49772784 (+)
AMCG00014037 NA coding upstream 146733 49770593 ~ 49771894 (+)
AMCG00014030 NA coding upstream 180468 49736414 ~ 49738159 (+)
AMCG00014049 NA coding downstream 1523 49927226 ~ 49929020 (+)
G48560 tmcc2,LOC106565656 non-coding upstream 45250 49871106 ~ 49873377 (+)
G48552 NA non-coding upstream 60940 49857480 ~ 49857687 (+)
G48479 NA non-coding upstream 124977 49793206 ~ 49793650 (+)
G48467 NA non-coding upstream 164600 49753584 ~ 49754027 (+)
G48460 NA non-coding upstream 186827 49729671 ~ 49731800 (+)
G48566 NA other upstream 4085 49913929 ~ 49914542 (+)
AMCG00014038 NA other upstream 104642 49808148 ~ 49813985 (+)
AMCG00014028 NA other upstream 169458 49739312 ~ 49749169 (+)
G48464 NA other upstream 176113 49741852 ~ 49742514 (+)
G48457 NA other upstream 194751 49723026 ~ 49723876 (+)
G48578 NA other downstream 11112 49936815 ~ 49948082 (+)
G48583 NA other downstream 30489 49956192 ~ 49956729 (+)

Expression


Co-expression Network