AMCG00014046


Basic Information

Item Value
gene id AMCG00014046
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49783272 ~ 49788746 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014046
ATGGGAAAGTCCTGGGAACGCCTACCTGGTCCATCGATGAAGCAAGTGGACCTAAAGATCATCATCCTTGGAGCCCTGGGTGTGGGAAAGACATCATTGTTGCACCAGTATATCCACCAGCGATACTACGATGATTACCGCACTACTCTGGGAGCCAGTGTGATGTCCAAGAACATCACAGTAGATAACCAAGCTGTCAAGATGCAGATCTGGGACACGGGGGGCCAGGAGAGATTCCGCTCGGTTGTGTCTACCTTCTACAAGGGGGTCGACGGCTGCATCCTCGCCTTTGATGTGACTGACAGGGATTCCTTTCTGGAGCTGGAGGGCTGGAGGCAGGATATTCTGGACAAGACCCACCCACCGGACCCCAGCCTGCCCTTCGTGCTCCTGGGGAACAAGATCGACATGCAGGATAGACAGGTGAGCAGCGGAAACGCGGCGCAGTGGAGTGAGGAAAGAAACATTCCCTACCTGGAGGTCAGCGCCAAGGACAACATCAATGTGGAGCAGGCCTTCCAGACCCTGGCAGGACATGCACTCATTAGGCACAAAGAGGGACTTATGAGCTACATGACAGACTCGATCAAACTCAAACCCGAGAAGACATCAAAGAAAAGGAGGAAATGCTGTTCATAGAATATATACACAACAATTTTCATCCCCCACCCACCGCGGCTCTCCGTCTGTGGGACCCTGCAGATGTGACTGCTGTCAAGTGACTTCTTTACTAGTGCAGCAGCTCTGATGAGGATCCAAGGTCAGGGTACAGTGTGAAGCACAGACAGGTTTGATCATTCAGTAGAAATTAATAAGTTTCACTGGACTGTTACTGAAGATCAAAGAATGGACACTACATCACATCACTGAAGCACATCTTCTTGTTGAAGAATGACAGTGATCCCCCCAGTTCCAGAGTGGAGGATGTCAGTACTGTAACTCCCAGTTTGTAAGacctgtaaagaaaaaaagattacattAGACTCAGTTTCCAATTTTTTCATTACTTGCTAGAAGACACAGAAAGAACATTTTACCAAGTAATCCAGTATAAGCATTTCACGGTTTCCACTGCTGCTAACCAGTTTCACCCATGGTTATGTTAGcatcattttgaaaacagacaCATCTATCGCCCAGTACAGAGACTATTGTTTCCAATACAACATATTTGCAATACTGAAGAGGTTCTTAGAATCtgtgtaaagaaacaaaacattttgatataAACACTTTAATTATAAAGGAAAAATGTTGCAAAGTATGAACTCAGATTGGTATTGGTTTCAAAGTCCTTATAATACTAACAAACTGATGTCTATGGTTTGAAGCAGGCAGAGAAGATAAGAGACATTTTACTCGGTGGGGTATTTACATGTTGCGAGACCTAATCTCAAATAAATTGACTGGAAGTGGCTTGGTCATCTGTCCTATACACCCAACTCTTTTTGTCTCCTAGTGTTGAGATATATTGTGAtctattttatgaataaatattgtaattgttctccgtgtttttctgctgtatttggtttctttgttgAGCTTTCAGTCACATCTCACCACAGTCTCTATTGGTC

Function

GO:

id name namespace
GO:0005770 late endosome cellular_component

KEGG:

id description
K07898 RAB7B; Ras-related protein Rab-7B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014046 True 1580 mRNA 0.44 6 49783272 49788746

Neighbor

gene id symbol gene type direction distance location
AMCG00014036 NA coding downstream 26031 49750468 ~ 49757241 (-)
AMCG00014035 NA coding downstream 79899 49697861 ~ 49703373 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding downstream 89108 49689679 ~ 49694164 (-)
AMCG00014024 NA coding downstream 102910 49678320 ~ 49680362 (-)
AMCG00014023 NA coding downstream 176078 49595783 ~ 49607194 (-)
AMCG00014048 NA coding upstream 2597 49791343 ~ 49794766 (-)
AMCG00014047 NA coding upstream 8100 49796846 ~ 49804601 (-)
AMCG00014045 NA coding upstream 25303 49814049 ~ 49818276 (-)
AMCG00014042 dstyk coding upstream 31734 49820480 ~ 49831371 (-)
AMCG00014041 NA coding upstream 100540 49889286 ~ 49901963 (-)
G48517 NA non-coding downstream 33990 49748589 ~ 49749282 (-)
G48512 NA non-coding downstream 49100 49733909 ~ 49734172 (-)
G48509 NA non-coding downstream 56265 49726288 ~ 49727007 (-)
G48508 NA non-coding downstream 57023 49725735 ~ 49726249 (-)
G48494 NA non-coding downstream 107522 49663092 ~ 49675750 (-)
G48516 NA other downstream 35721 49744946 ~ 49747551 (-)
G48510 NA other downstream 54217 49728504 ~ 49729055 (-)
AMCG00014033 NA other downstream 59035 49721746 ~ 49724237 (-)
G48506 NA other downstream 61746 49719765 ~ 49721526 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 284642 49494727 ~ 49498630 (-)
AMCG00014043 tmcc2 other upstream 75576 49864322 ~ 49930152 (-)
G48570 tmcc2,LOC106583086,LOC106565656 other upstream 82247 49870993 ~ 49918397 (-)

Expression


Co-expression Network