G38458



Basic Information


Item Value
gene id G38458
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 1776854 ~ 1777221 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU47949
ctggggatcacgatcaacgggaccaacacgggcacccggagctgggaggaggccTTATCCAAGGTCCAAAGAAAGATCCACGGCtagagcacaaggaccttgacgatggccggtaaggtgctggtcgtaaaggccatcctcttcccgatactcCTCTACGTAGGaatgatcttccccccagacaaggtcgtcgcaaaactagtgaccagaattatatttcagtttgtctgggggagcaaaatggagaggctgaagagagtgcaaatggtgaagggtaccctggatggaggcaggggggtcccggacgttgtgcggctgataaaggcgcaggggctggcctacgtggtcaagaacatccaggctgcttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU47949 True 368 TUCP 0.56 1 1776854 1777221

Neighbor


gene id symbol gene type direction distance location
AMCG00012642 NA coding downstream 194584 1360323 ~ 1582270 (-)
AMCG00012643 aebp2,LOC103380429,LOC101074123,LOC106609187 coding downstream 430936 1038769 ~ 1345918 (-)
AMCG00012640 NA coding downstream 739501 1013482 ~ 1037353 (-)
AMCG00012635 pde3a coding downstream 856729 914435 ~ 920125 (-)
AMCG00012636 NA coding downstream 883237 866131 ~ 893617 (-)
AMCG00012649 NA coding upstream 538781 2316002 ~ 2317119 (-)
AMCG00012648 NA coding upstream 542306 2319527 ~ 2345217 (-)
AMCG00012655 slc25a3,LOC102778869,LOC105895663 coding upstream 644387 2421608 ~ 2431840 (-)
AMCG00012656 NA coding upstream 659629 2436850 ~ 2468497 (-)
AMCG00012663 NA coding upstream 1100547 2877768 ~ 2910246 (-)
G38355 NA non-coding downstream 936367 837111 ~ 840487 (-)
G38305 NA non-coding downstream 1180036 596608 ~ 596818 (-)
G38472 NA non-coding upstream 107408 1884629 ~ 1887591 (-)
G38473 NA non-coding upstream 123539 1900760 ~ 1901924 (-)
G38475 NA non-coding upstream 217626 1994847 ~ 1995063 (-)
G38478 NA non-coding upstream 254616 2031837 ~ 2032211 (-)
G38501 NA non-coding upstream 517739 2294960 ~ 2295164 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 1237263 514222 ~ 539591 (-)
G38490 NA other upstream 406664 2183885 ~ 2184163 (-)
AMCG00012732 NA other upstream 4275143 6052364 ~ 6063817 (-)
G39487 NA other upstream 4678500 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 4861259 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 6114268 7891489 ~ 7904455 (-)

Expression



Co-expression Network