Gene
RNA
| Item | Value |
|---|---|
| gene id | G38472 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 1884629 ~ 1887591 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU47965 | True | 273 | lncRNA | 0.34 | 2 | 1884629 | 1887591 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012642 | NA | coding | downstream | 302359 | 1360323 ~ 1582270 (-) |
| AMCG00012643 | aebp2,LOC103380429,LOC101074123,LOC106609187 | coding | downstream | 538711 | 1038769 ~ 1345918 (-) |
| AMCG00012640 | NA | coding | downstream | 847276 | 1013482 ~ 1037353 (-) |
| AMCG00012635 | pde3a | coding | downstream | 964504 | 914435 ~ 920125 (-) |
| AMCG00012636 | NA | coding | downstream | 991012 | 866131 ~ 893617 (-) |
| AMCG00012649 | NA | coding | upstream | 428411 | 2316002 ~ 2317119 (-) |
| AMCG00012648 | NA | coding | upstream | 431936 | 2319527 ~ 2345217 (-) |
| AMCG00012655 | slc25a3,LOC102778869,LOC105895663 | coding | upstream | 534017 | 2421608 ~ 2431840 (-) |
| AMCG00012656 | NA | coding | upstream | 549259 | 2436850 ~ 2468497 (-) |
| AMCG00012663 | NA | coding | upstream | 990177 | 2877768 ~ 2910246 (-) |
| G38355 | NA | non-coding | downstream | 1044142 | 837111 ~ 840487 (-) |
| G38305 | NA | non-coding | downstream | 1287811 | 596608 ~ 596818 (-) |
| G38473 | NA | non-coding | upstream | 13169 | 1900760 ~ 1901924 (-) |
| G38475 | NA | non-coding | upstream | 107256 | 1994847 ~ 1995063 (-) |
| G38478 | NA | non-coding | upstream | 144246 | 2031837 ~ 2032211 (-) |
| G38501 | NA | non-coding | upstream | 407369 | 2294960 ~ 2295164 (-) |
| G38533 | NA | non-coding | upstream | 611332 | 2498923 ~ 2500343 (-) |
| AMCG00012646 | LOC107658747,LOC107707963 | other | downstream | 67429 | 1578955 ~ 1817200 (-) |
| G38458 | NA | other | downstream | 107408 | 1776854 ~ 1777221 (-) |
| AMCG00012628 | golt1b,LOC108428784,LOC107676462,LOC107701063 | other | downstream | 1345038 | 514222 ~ 539591 (-) |
| G38490 | NA | other | upstream | 296294 | 2183885 ~ 2184163 (-) |
| AMCG00012732 | NA | other | upstream | 4164773 | 6052364 ~ 6063817 (-) |
| G39487 | NA | other | upstream | 4568130 | 6455721 ~ 6456178 (-) |
| AMCG00012751 | NA | other | upstream | 4750889 | 6638480 ~ 6695924 (-) |
| AMCG00012782 | NA | other | upstream | 6003898 | 7891489 ~ 7904455 (-) |
