G38533


Basic Information

Item Value
gene id G38533
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2498923 ~ 2500343 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU48044
TGCCAGAGTCTCGTTCGATGGCTTTCTTCACTTTGCCGTAGGTCCCTCTGCCCAGCGTCTCCAGTAGCTCGTAGCGGTGTTTGAGGTTGTGCTTGTGATGGTGCTTCTTCACGCTCGGTCTTCTCCTGCTCTCCCCGGCTGTCGAGCCACAGCCGCCGGCCACCGGGCTAGCCGGAAGCGGGCAGGGCAGGCTGTCTCTCCGGGTCATCGCCGCCCCGTGCAGGGCTAGTTCCGCACCAGAACGGGGGACCCGGGGCGGCGAGGGCGAGATGCGAGCAgtatccataaaaaaaaaaatgcgcacttacttttttcctttctttaacaGTTCTgtgatctatttttaaatatatttataaacaaatgcatatatcgACGCTAAAGGCAAatacctataaataataataataataataataataataataataataataaataggttTTAAGATTTGAGCTGCATCGCCTCTTGTATTCCTGCTAgctagttttttttaatcactacAGCTGATTATCTCTCCCGGTTTACATAAAGaattaagtaaagaaaaaagtacccatacagtgagagaaagggCGATTGTATGGATGAAAACAGATGTCATTCGTTaatgacatttcaaaataaagtgcacagtATTCTGGAGCAGgagggggattttttttttaagttaatagGTTTGCTAAGTtcagtaatattatatatatatatataatataaggtcgAATTAGGTTTCCTTCCTCACTTTCGCTCTCAGAGCGAACACGGTGTCTTCACGTAGCCTGTCCAATCCAAGCACATACAGACCTGAATTTACACCACATattgaatattaatttatataaaataatataaagcaaAACTACATTAGACTCGCCCGaggattttaattaacaaactgTAGTCTTTTTTCCGTTTCCGTTTATCGTGTTGAGACATGGTCGGCCGTTTTCGGCTGCACACCGTTATGCACTGCGAGTGTATACAGCTGTACTGTAGGTAGGTccaaaaaaatgcagtttagaTTAAGATATAAAAGtctgagaaataaatacttaggagaaaaaaataaaaataaatcaacgcCAGCGTCATCGGCTCCCGAAAAGGCAGTGACCAACCTGGTGCTCCTGGGGGAAACGGAGCTCATTTTGCCCCCATGCCCGGCACTCGGAATCTGGACCTGTAATCCGTGGCGACGGTGCGGTCAGAGGTGTGCGGTGTACAGTTACAGGCTGCTGAAGCTTTCTCTGAACGGCCATGCTCATTATATCCCCTTTCGCTCtcgccctctccctccctctctgtctttcgCTCATCTGGAAGACTGTGAATAAGGAATGCGAACCGTATGCAACCGGAGGTGGAGTTACACTTCACAGAGC

Function

GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0007599 hemostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48044 True 1386 lncRNA 0.44 2 2498923 2500343

Neighbor

gene id symbol gene type direction distance location
AMCG00012656 NA coding downstream 30426 2436850 ~ 2468497 (-)
AMCG00012655 slc25a3,LOC102778869,LOC105895663 coding downstream 67083 2421608 ~ 2431840 (-)
AMCG00012648 NA coding downstream 153706 2319527 ~ 2345217 (-)
AMCG00012649 NA coding downstream 181804 2316002 ~ 2317119 (-)
AMCG00012642 NA coding downstream 916653 1360323 ~ 1582270 (-)
AMCG00012663 NA coding upstream 377425 2877768 ~ 2910246 (-)
AMCG00012664 NA coding upstream 421358 2921701 ~ 2962489 (-)
AMCG00012665 LOC105909609,LOC107680042,LOC107710670 coding upstream 587093 3087436 ~ 3100475 (-)
AMCG00012662 NA coding upstream 620857 3121200 ~ 3170801 (-)
AMCG00012666 NA coding upstream 702811 3203154 ~ 3272283 (-)
G38501 NA non-coding downstream 203759 2294960 ~ 2295164 (-)
G38478 NA non-coding downstream 466712 2031837 ~ 2032211 (-)
G38475 NA non-coding downstream 503860 1994847 ~ 1995063 (-)
G38473 NA non-coding downstream 596999 1900760 ~ 1901924 (-)
G38472 NA non-coding downstream 611332 1884629 ~ 1887591 (-)
G38539 NA non-coding upstream 63962 2564305 ~ 2564702 (-)
G38549 NA non-coding upstream 105155 2605498 ~ 2605768 (-)
G38552 NA non-coding upstream 122646 2622989 ~ 2623189 (-)
G38573 NA non-coding upstream 225686 2726029 ~ 2775202 (-)
G38581 NA non-coding upstream 278507 2778850 ~ 2791524 (-)
G38490 NA other downstream 314760 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 681723 1578955 ~ 1817200 (-)
G38458 NA other downstream 721702 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 1959332 514222 ~ 539591 (-)
AMCG00012732 NA other upstream 3552021 6052364 ~ 6063817 (-)
G39487 NA other upstream 3955378 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 4138137 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 5391146 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 6612098 9112441 ~ 9152405 (-)

Expression


Co-expression Network