G38551


Basic Information

Item Value
gene id G38551
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2616922 ~ 2617197 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU48064
AGCAAATCTAGCtatcttaaaacatttgttagagaaaagaaagaaaatacaaaaggcATAATTCAATCTAGCCTAAGCTGAATGCaccaaagacaaataaaaattcAGTATAAATGAGTCCTCAAGATACTGAAGGAAAATTACTAGATAAGTAATAAATAAGGgtagtttgagacactgcaggtcaaTATAACATGCCAACCAAAACCATGGTATCCGAATTTACTTTggatataaattaatatgtgtctctttgtatgtttgtacGTTTACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48064 True 276 lncRNA 0.31 1 2616922 2617197

Neighbor

gene id symbol gene type direction distance location
AMCG00012657 LOC107725508 coding upstream 76741 2500058 ~ 2540181 (+)
AMCG00012651 NA coding upstream 212565 2397489 ~ 2404357 (+)
AMCG00012652 NA coding upstream 225218 2361338 ~ 2391704 (+)
AMCG00012654 NA coding upstream 255997 2359186 ~ 2360925 (+)
AMCG00012653 NA coding upstream 257775 2333875 ~ 2359147 (+)
AMCG00012658 NA coding downstream 194801 2811998 ~ 2851213 (+)
AMCG00012659 guca1a coding downstream 560201 3177398 ~ 3181902 (+)
AMCG00012660 NA coding downstream 566983 3184180 ~ 3184551 (+)
AMCG00012661 NA coding downstream 568813 3186010 ~ 3186423 (+)
AMCG00012667 LOC102193253,LOC101485328,LOC102216727,LOC107092731,LOC104960979 coding downstream 851873 3469070 ~ 3477927 (+)
G38531 LOC103376870 non-coding upstream 84133 2456757 ~ 2532789 (+)
G38530 NA non-coding upstream 148069 2449783 ~ 2468853 (+)
G38526 NA non-coding upstream 176889 2438097 ~ 2440033 (+)
G38505 NA non-coding upstream 185514 2414521 ~ 2431408 (+)
G38503 NA non-coding upstream 319743 2296692 ~ 2297179 (+)
G38553 NA non-coding downstream 18421 2635618 ~ 2636030 (+)
G38554 NA non-coding downstream 53448 2670645 ~ 2670969 (+)
G38566 NA non-coding downstream 80645 2697842 ~ 2698321 (+)
G38568 NA non-coding downstream 81209 2698406 ~ 2698790 (+)
G38611 NA non-coding downstream 317079 2934276 ~ 2935435 (+)
AMCG00012641 NA other upstream 1035534 1394839 ~ 1581388 (+)
AMCG00012639 LOC105896728,LOC103361979,LOC104943185,LOC102310764,LOC102198406,LOC100699467,LOC101465237 other upstream 1777656 778908 ~ 839266 (+)
AMCG00012681 NA other downstream 1566678 4183875 ~ 4251594 (+)
G38954 NA other downstream 1753116 4370313 ~ 4373574 (+)
G39297 NA other downstream 2935220 5552417 ~ 5552767 (+)
AMCG00012718 NA other downstream 3190649 5807846 ~ 5823515 (+)
AMCG00012734 NA other downstream 3435951 6053148 ~ 6056832 (+)

Expression


Co-expression Network