G38680


Basic Information

Item Value
gene id G38680
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 3134059 ~ 3134271 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU48211
gagtttggaatctgattgattgattgcttctgtggacaggagTCTTTTATACAGTTAACGAGtggagattaggagcactcctaatctcagctcattacctgtataaaagacacctgggaaccagaaatcttgctgattgataggggatcaaatacttatttccctgattaacatgcaaatcaatttataacttttttgaaatgcgtttttctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48211 True 213 lncRNA 0.37 1 3134059 3134271

Neighbor

gene id symbol gene type direction distance location
AMCG00012658 NA coding upstream 282846 2811998 ~ 2851213 (+)
AMCG00012657 LOC107725508 coding upstream 593878 2500058 ~ 2540181 (+)
AMCG00012651 NA coding upstream 729702 2397489 ~ 2404357 (+)
AMCG00012652 NA coding upstream 742355 2361338 ~ 2391704 (+)
AMCG00012654 NA coding upstream 773134 2359186 ~ 2360925 (+)
AMCG00012659 guca1a coding downstream 43127 3177398 ~ 3181902 (+)
AMCG00012660 NA coding downstream 49909 3184180 ~ 3184551 (+)
AMCG00012661 NA coding downstream 51739 3186010 ~ 3186423 (+)
AMCG00012667 LOC102193253,LOC101485328,LOC102216727,LOC107092731,LOC104960979 coding downstream 334799 3469070 ~ 3477927 (+)
AMCG00012669 NA coding downstream 452113 3586384 ~ 3611175 (+)
G38673 NA non-coding upstream 9689 3121246 ~ 3124370 (+)
G38617 NA non-coding upstream 146078 2942735 ~ 2987981 (+)
G38616 NA non-coding upstream 191641 2942136 ~ 2942418 (+)
G38615 NA non-coding upstream 192842 2940850 ~ 2941217 (+)
G38614 LOC108439415,LOC107680110,LOC107754377 non-coding upstream 193977 2939855 ~ 2940082 (+)
G38682 NA non-coding downstream 6758 3141029 ~ 3141273 (+)
G38683 NA non-coding downstream 10360 3144631 ~ 3144895 (+)
G38686 NA non-coding downstream 21435 3155706 ~ 3156240 (+)
G38687 NA non-coding downstream 22291 3156562 ~ 3158832 (+)
G38689 NA non-coding downstream 37275 3171546 ~ 3171746 (+)
AMCG00012641 NA other upstream 1552671 1394839 ~ 1581388 (+)
AMCG00012639 LOC105896728,LOC103361979,LOC104943185,LOC102310764,LOC102198406,LOC100699467,LOC101465237 other upstream 2294793 778908 ~ 839266 (+)
AMCG00012681 NA other downstream 1049604 4183875 ~ 4251594 (+)
G38954 NA other downstream 1236042 4370313 ~ 4373574 (+)
G39297 NA other downstream 2418146 5552417 ~ 5552767 (+)
AMCG00012718 NA other downstream 2673575 5807846 ~ 5823515 (+)
AMCG00012734 NA other downstream 2918877 6053148 ~ 6056832 (+)

Expression


Co-expression Network