Gene
RNA
| Item | Value |
|---|---|
| gene id | G38841 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 3783160 ~ 3783391 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48413 | True | 232 | lncRNA | 0.40 | 1 | 3783160 | 3783391 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012673 | LOC106910051 | coding | downstream | 10173 | 3757095 ~ 3772987 (-) |
| AMCG00012671 | NA | coding | downstream | 28165 | 3738744 ~ 3754995 (-) |
| AMCG00012672 | NA | coding | downstream | 53514 | 3727446 ~ 3729646 (-) |
| AMCG00012674 | mapk11,LOC108442323,LOC105020226,LOC103035641,LOC106609456,LOC107725929,LOC100700904,LOC108279456 | coding | downstream | 61760 | 3678679 ~ 3721400 (-) |
| AMCG00012670 | NA | coding | downstream | 119947 | 3652207 ~ 3663213 (-) |
| AMCG00012676 | srpk2,LOC107552422 | coding | upstream | 78657 | 3862048 ~ 3863424 (-) |
| AMCG00012677 | usf2,LOC101066260 | coding | upstream | 197399 | 3980790 ~ 3990090 (-) |
| AMCG00012678 | usf2,LOC105007924 | coding | upstream | 231781 | 4015172 ~ 4024403 (-) |
| AMCG00012682 | NA | coding | upstream | 520604 | 4303995 ~ 4308720 (-) |
| AMCG00012683 | NA | coding | upstream | 565716 | 4349107 ~ 4367364 (-) |
| G38791 | NA | non-coding | downstream | 144294 | 3554385 ~ 3638866 (-) |
| G38792 | NA | non-coding | downstream | 221310 | 3506837 ~ 3561850 (-) |
| G38743 | NA | non-coding | downstream | 351824 | 3429936 ~ 3431336 (-) |
| G38740 | reln | non-coding | downstream | 435513 | 3311332 ~ 3347647 (-) |
| G38650 | NA | non-coding | downstream | 861498 | 2916028 ~ 2921662 (-) |
| G38842 | NA | non-coding | upstream | 413 | 3783804 ~ 3784050 (-) |
| G38909 | NA | non-coding | upstream | 190962 | 3974353 ~ 3976596 (-) |
| G38910 | NA | non-coding | upstream | 254048 | 4037439 ~ 4096741 (-) |
| G38965 | NA | non-coding | upstream | 343616 | 4127007 ~ 4517632 (-) |
| G39017 | NA | non-coding | upstream | 543692 | 4327083 ~ 4329635 (-) |
| G38490 | NA | other | downstream | 1598997 | 2183885 ~ 2184163 (-) |
| AMCG00012646 | LOC107658747,LOC107707963 | other | downstream | 1965960 | 1578955 ~ 1817200 (-) |
| G38458 | NA | other | downstream | 2005939 | 1776854 ~ 1777221 (-) |
| AMCG00012628 | golt1b,LOC108428784,LOC107676462,LOC107701063 | other | downstream | 3243569 | 514222 ~ 539591 (-) |
| AMCG00012732 | NA | other | upstream | 2268973 | 6052364 ~ 6063817 (-) |
| G39487 | NA | other | upstream | 2672330 | 6455721 ~ 6456178 (-) |
| AMCG00012751 | NA | other | upstream | 2855089 | 6638480 ~ 6695924 (-) |
| AMCG00012782 | NA | other | upstream | 4108098 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 5329050 | 9112441 ~ 9152405 (-) |
