Gene
RNA
| Item | Value |
|---|---|
| gene id | G38910 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 4037439 ~ 4096741 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48498 | True | 459 | lncRNA | 0.42 | 2 | 4037439 | 4096741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012678 | usf2,LOC105007924 | coding | downstream | 13036 | 4015172 ~ 4024403 (-) |
| AMCG00012677 | usf2,LOC101066260 | coding | downstream | 47349 | 3980790 ~ 3990090 (-) |
| AMCG00012676 | srpk2,LOC107552422 | coding | downstream | 174015 | 3862048 ~ 3863424 (-) |
| AMCG00012673 | LOC106910051 | coding | downstream | 264452 | 3757095 ~ 3772987 (-) |
| AMCG00012671 | NA | coding | downstream | 282444 | 3738744 ~ 3754995 (-) |
| AMCG00012682 | NA | coding | upstream | 207254 | 4303995 ~ 4308720 (-) |
| AMCG00012683 | NA | coding | upstream | 252366 | 4349107 ~ 4367364 (-) |
| AMCG00012684 | NA | coding | upstream | 283132 | 4379873 ~ 4381284 (-) |
| AMCG00012688 | ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950 | coding | upstream | 410886 | 4507627 ~ 4508220 (-) |
| AMCG00012690 | NA | coding | upstream | 527174 | 4623915 ~ 4642672 (-) |
| G38909 | NA | non-coding | downstream | 60843 | 3974353 ~ 3976596 (-) |
| G38842 | NA | non-coding | downstream | 253389 | 3783804 ~ 3784050 (-) |
| G38841 | NA | non-coding | downstream | 254048 | 3783160 ~ 3783391 (-) |
| G38791 | NA | non-coding | downstream | 398573 | 3554385 ~ 3638866 (-) |
| G38792 | NA | non-coding | downstream | 475589 | 3506837 ~ 3561850 (-) |
| G38965 | NA | non-coding | upstream | 30266 | 4127007 ~ 4517632 (-) |
| G39017 | NA | non-coding | upstream | 230342 | 4327083 ~ 4329635 (-) |
| G39160 | NA | non-coding | upstream | 688953 | 4785694 ~ 4786528 (-) |
| G39174 | NA | non-coding | upstream | 817262 | 4914003 ~ 4916594 (-) |
| G39175 | LOC106613431,LOC106584099,LOC106573797,LOC106609167 | non-coding | upstream | 833047 | 4929788 ~ 4930753 (-) |
| G38490 | NA | other | downstream | 1853276 | 2183885 ~ 2184163 (-) |
| AMCG00012646 | LOC107658747,LOC107707963 | other | downstream | 2220239 | 1578955 ~ 1817200 (-) |
| G38458 | NA | other | downstream | 2260218 | 1776854 ~ 1777221 (-) |
| AMCG00012628 | golt1b,LOC108428784,LOC107676462,LOC107701063 | other | downstream | 3497848 | 514222 ~ 539591 (-) |
| AMCG00012732 | NA | other | upstream | 1955623 | 6052364 ~ 6063817 (-) |
| G39487 | NA | other | upstream | 2358980 | 6455721 ~ 6456178 (-) |
| AMCG00012751 | NA | other | upstream | 2541739 | 6638480 ~ 6695924 (-) |
| AMCG00012782 | NA | other | upstream | 3794748 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 5015700 | 9112441 ~ 9152405 (-) |
