Gene
RNA
| Item | Value |
|---|---|
| gene id | G38965 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 4127007 ~ 4517632 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48565 | True | 946 | lncRNA | 0.40 | 2 | 4127007 | 4517632 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012678 | usf2,LOC105007924 | coding | downstream | 102604 | 4015172 ~ 4024403 (-) |
| AMCG00012677 | usf2,LOC101066260 | coding | downstream | 136917 | 3980790 ~ 3990090 (-) |
| AMCG00012676 | srpk2,LOC107552422 | coding | downstream | 263583 | 3862048 ~ 3863424 (-) |
| AMCG00012673 | LOC106910051 | coding | downstream | 354020 | 3757095 ~ 3772987 (-) |
| AMCG00012671 | NA | coding | downstream | 372012 | 3738744 ~ 3754995 (-) |
| AMCG00012690 | NA | coding | upstream | 106283 | 4623915 ~ 4642672 (-) |
| AMCG00012691 | NA | coding | upstream | 167284 | 4684916 ~ 4696006 (-) |
| AMCG00012689 | LOC107744925,LOC107664854,LOC107588513,LOC107590206,LOC107695881,LOC107725616 | coding | upstream | 243053 | 4760685 ~ 4772958 (-) |
| AMCG00012693 | mybpc1 | coding | upstream | 269902 | 4787534 ~ 4827776 (-) |
| AMCG00012692 | NA | coding | upstream | 322595 | 4840227 ~ 4846796 (-) |
| G38910 | NA | non-coding | downstream | 30266 | 4037439 ~ 4096741 (-) |
| G38909 | NA | non-coding | downstream | 150411 | 3974353 ~ 3976596 (-) |
| G38842 | NA | non-coding | downstream | 342957 | 3783804 ~ 3784050 (-) |
| G38841 | NA | non-coding | downstream | 343616 | 3783160 ~ 3783391 (-) |
| G38791 | NA | non-coding | downstream | 488141 | 3554385 ~ 3638866 (-) |
| G39160 | NA | non-coding | upstream | 268062 | 4785694 ~ 4786528 (-) |
| G39174 | NA | non-coding | upstream | 396371 | 4914003 ~ 4916594 (-) |
| G39175 | LOC106613431,LOC106584099,LOC106573797,LOC106609167 | non-coding | upstream | 412156 | 4929788 ~ 4930753 (-) |
| G39189 | NA | non-coding | upstream | 413612 | 4931244 ~ 5006607 (-) |
| G39231 | med21,LOC102798687 | non-coding | upstream | 688972 | 5206604 ~ 5209859 (-) |
| G38490 | NA | other | downstream | 1942844 | 2183885 ~ 2184163 (-) |
| AMCG00012646 | LOC107658747,LOC107707963 | other | downstream | 2309807 | 1578955 ~ 1817200 (-) |
| G38458 | NA | other | downstream | 2349786 | 1776854 ~ 1777221 (-) |
| AMCG00012628 | golt1b,LOC108428784,LOC107676462,LOC107701063 | other | downstream | 3587416 | 514222 ~ 539591 (-) |
| AMCG00012732 | NA | other | upstream | 1534732 | 6052364 ~ 6063817 (-) |
| G39487 | NA | other | upstream | 1938089 | 6455721 ~ 6456178 (-) |
| AMCG00012751 | NA | other | upstream | 2120848 | 6638480 ~ 6695924 (-) |
| AMCG00012782 | NA | other | upstream | 3373857 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 4594809 | 9112441 ~ 9152405 (-) |
