Gene
RNA
| Item | Value |
|---|---|
| gene id | G39231 |
| gene name | med21,LOC102798687 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 5206604 ~ 5209859 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| med21 | Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED21 (mediator complex subunit 21). |
| description |
|---|
| PREDICTED: mediator of RNA polymerase II transcription subunit 21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48887 | True | 555 | lncRNA | 0.47 | 2 | 5206604 | 5209859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012710 | NA | coding | downstream | 3439 | 5190953 ~ 5203165 (-) |
| AMCG00012707 | slc17a8,LOC107553956,LOC107686235,LOC107672209 | coding | downstream | 35382 | 5153275 ~ 5171222 (-) |
| AMCG00012708 | NA | coding | downstream | 84098 | 5097321 ~ 5122506 (-) |
| AMCG00012709 | gas2l3 | coding | downstream | 112376 | 5072885 ~ 5094228 (-) |
| AMCG00012704 | NA | coding | downstream | 200907 | 4996564 ~ 5005697 (-) |
| AMCG00012711 | NA | coding | upstream | 78169 | 5288028 ~ 5303893 (-) |
| AMCG00012712 | syt10,LOC106609485 | coding | upstream | 202347 | 5412206 ~ 5414340 (-) |
| AMCG00012713 | syt10 | coding | upstream | 214842 | 5424701 ~ 5436981 (-) |
| AMCG00012714 | LOC105020308,LOC104958207,LOC100694258,LOC106609412 | coding | upstream | 424606 | 5634465 ~ 5639532 (-) |
| AMCG00012716 | NA | coding | upstream | 582179 | 5792038 ~ 5805393 (-) |
| G39189 | NA | non-coding | downstream | 199997 | 4931244 ~ 5006607 (-) |
| G39175 | LOC106613431,LOC106584099,LOC106573797,LOC106609167 | non-coding | downstream | 275851 | 4929788 ~ 4930753 (-) |
| G39174 | NA | non-coding | downstream | 290010 | 4914003 ~ 4916594 (-) |
| G39160 | NA | non-coding | downstream | 420076 | 4785694 ~ 4786528 (-) |
| G38965 | NA | non-coding | downstream | 688972 | 4127007 ~ 4517632 (-) |
| G39245 | NA | non-coding | upstream | 10912 | 5220771 ~ 5282686 (-) |
| G39246 | LOC100846954 | non-coding | upstream | 24303 | 5234162 ~ 5250471 (-) |
| G39281 | NA | non-coding | upstream | 178334 | 5388193 ~ 5408760 (-) |
| G39295 | NA | non-coding | upstream | 335975 | 5545834 ~ 5546069 (-) |
| G39371 | NA | non-coding | upstream | 568431 | 5778290 ~ 5812036 (-) |
| G38490 | NA | other | downstream | 3022441 | 2183885 ~ 2184163 (-) |
| AMCG00012646 | LOC107658747,LOC107707963 | other | downstream | 3389404 | 1578955 ~ 1817200 (-) |
| G38458 | NA | other | downstream | 3429383 | 1776854 ~ 1777221 (-) |
| AMCG00012628 | golt1b,LOC108428784,LOC107676462,LOC107701063 | other | downstream | 4667013 | 514222 ~ 539591 (-) |
| AMCG00012732 | NA | other | upstream | 842505 | 6052364 ~ 6063817 (-) |
| G39487 | NA | other | upstream | 1245862 | 6455721 ~ 6456178 (-) |
| AMCG00012751 | NA | other | upstream | 1428621 | 6638480 ~ 6695924 (-) |
| AMCG00012782 | NA | other | upstream | 2681630 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 3902582 | 9112441 ~ 9152405 (-) |
