G39297


Basic Information

Item Value
gene id G39297
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 5552417 ~ 5552767 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU48986
GCCTGGAGCCGCCAGCGGGGCTGTTGTCCATCCTGCAGAGGGAGCTGTTGGGCTTtttctggactggactgcactggcTACGACAGGGCGTACTATACCTGCCCCATGATGAGGGGGGGCAAGGGCTGGTGGACGTGGAGAGCAGGATGGGTGCTTTCCGCCTGCAGTTCCTGCAGAAGTTGCTCTACAGCCCGAGCCTCCTGTCCTGGAGGCCACTGGTGTGCGCCCTGCTCCGTCAGGTGGGGACGCTGCAGGTGGACAGGGCAATGTTCCTGATGGATATTAGCGGGCTGGCAGCAGGCACCCTTTCAGGATTCTACCGCAGTGTGCTGAGGGCCTGGCAGCTGCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48986 True 351 TUCP 0.63 1 5552417 5552767

Neighbor

gene id symbol gene type direction distance location
AMCG00012733 NA coding upstream 44416 5507669 ~ 5508001 (+)
AMCG00012719 si:ch211-245j22.3,LOC105895582,LOC104937698,LOC106573300,LOC107749310 coding upstream 239899 5305061 ~ 5312518 (+)
AMCG00012727 NA coding upstream 274303 5264273 ~ 5278114 (+)
AMCG00012724 stk38l coding upstream 309214 5235166 ~ 5243203 (+)
AMCG00012726 fgfr1op2 coding upstream 363097 5182302 ~ 5189320 (+)
AMCG00012723 NA coding downstream 50546 5603313 ~ 5629542 (+)
AMCG00012717 NA coding downstream 77636 5630403 ~ 5631119 (+)
AMCG00012722 NA coding downstream 87234 5640001 ~ 5646627 (+)
AMCG00012725 polr3b coding downstream 142364 5695131 ~ 5724754 (+)
AMCG00012721 rfx4,LOC106561413,LOC106573296 coding downstream 179223 5731990 ~ 5763147 (+)
G39279 NA non-coding upstream 115255 5436833 ~ 5437162 (+)
G39193 NA non-coding upstream 478291 5037547 ~ 5074126 (+)
G39186 NA non-coding upstream 596550 4949240 ~ 4955867 (+)
G38964 NA non-coding upstream 1034786 4517136 ~ 4517631 (+)
G38886 NA non-coding upstream 1575800 3974365 ~ 3976617 (+)
G39321 LOC100846954 non-coding downstream 95007 5647774 ~ 5648107 (+)
G39382 NA non-coding downstream 369847 5922614 ~ 5923023 (+)
G39445 NA non-coding downstream 732167 6284934 ~ 6287936 (+)
G39490 LOC103376870 non-coding downstream 959881 6512648 ~ 6536393 (+)
G39538 NA non-coding downstream 1209198 6761965 ~ 6762278 (+)
G38954 NA other upstream 1178843 4370313 ~ 4373574 (+)
AMCG00012681 NA other upstream 1300823 4183875 ~ 4251594 (+)
AMCG00012641 NA other upstream 3971029 1394839 ~ 1581388 (+)
AMCG00012639 LOC105896728,LOC103361979,LOC104943185,LOC102310764,LOC102198406,LOC100699467,LOC101465237 other upstream 4713151 778908 ~ 839266 (+)
AMCG00012718 NA other downstream 255079 5807846 ~ 5823515 (+)
AMCG00012734 NA other downstream 500381 6053148 ~ 6056832 (+)
AMCG00012748 itpr2,LOC100196824 other downstream 923482 6476249 ~ 6517983 (+)
AMCG00012763 NA other downstream 1791683 7344450 ~ 7381559 (+)
G39670 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 other downstream 2172721 7725488 ~ 7727828 (+)

Expression


Co-expression Network