Gene
RNA
| Item | Value |
|---|---|
| gene id | G39580 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 7150617 ~ 7150823 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: rab GDP dissociation inhibitor beta-like |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| id | description |
|---|---|
| ko00100 | Steroid biosynthesis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49351 | True | 207 | lncRNA | 0.43 | 1 | 7150617 | 7150823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012759 | NA | coding | downstream | 126099 | 7016105 ~ 7024518 (-) |
| AMCG00012758 | NA | coding | downstream | 169405 | 6928530 ~ 6981212 (-) |
| AMCG00012757 | strap,LOC106576022,LOC106609126,LOC105020178 | coding | downstream | 326852 | 6815808 ~ 6823765 (-) |
| AMCG00012752 | NA | coding | downstream | 530859 | 6607194 ~ 6619758 (-) |
| AMCG00012745 | NA | coding | downstream | 690591 | 6452009 ~ 6460026 (-) |
| AMCG00012760 | NA | coding | upstream | 62922 | 7213745 ~ 7235643 (-) |
| AMCG00012766 | NA | coding | upstream | 127879 | 7278702 ~ 7289692 (-) |
| AMCG00012764 | NA | coding | upstream | 171121 | 7321944 ~ 7333020 (-) |
| AMCG00012765 | NA | coding | upstream | 182922 | 7333745 ~ 7343454 (-) |
| AMCG00012769 | NA | coding | upstream | 237145 | 7387968 ~ 7390834 (-) |
| G39561 | NA | non-coding | downstream | 252380 | 6897987 ~ 6898237 (-) |
| G39546 | kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 | non-coding | downstream | 303221 | 6772968 ~ 6847396 (-) |
| G39556 | NA | non-coding | downstream | 354884 | 6786456 ~ 6795733 (-) |
| G39462 | NA | non-coding | downstream | 862682 | 6285455 ~ 6287935 (-) |
| G39443 | NA | non-coding | downstream | 881679 | 6268235 ~ 6268938 (-) |
| G39662 | NA | non-coding | upstream | 520413 | 7671236 ~ 7671642 (-) |
| G39707 | NA | non-coding | upstream | 676455 | 7827278 ~ 7828147 (-) |
| G39839 | NA | non-coding | upstream | 1118171 | 8268994 ~ 8269221 (-) |
| G39929 | NA | non-coding | upstream | 1417229 | 8568052 ~ 8569889 (-) |
| G39952 | NA | non-coding | upstream | 1509625 | 8660448 ~ 8667024 (-) |
| AMCG00012751 | NA | other | downstream | 454693 | 6638480 ~ 6695924 (-) |
| G39487 | NA | other | downstream | 694439 | 6455721 ~ 6456178 (-) |
| AMCG00012732 | NA | other | downstream | 1086800 | 6052364 ~ 6063817 (-) |
| G38490 | NA | other | downstream | 4966454 | 2183885 ~ 2184163 (-) |
| G38458 | NA | other | downstream | 5373396 | 1776854 ~ 1777221 (-) |
| AMCG00012782 | NA | other | upstream | 740666 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 1961618 | 9112441 ~ 9152405 (-) |
| AMCG00012858 | NA | other | upstream | 3589531 | 10740354 ~ 10753698 (-) |
| AMCG00012856 | lsm8,LOC107592220,LOC107580766,LOC107656302 | other | upstream | 3707058 | 10857881 ~ 10862322 (-) |
| AMCG00012888 | mkln1,LOC107104017 | other | upstream | 5089573 | 12240396 ~ 12271789 (-) |
