Gene
RNA
| Item | Value |
|---|---|
| gene id | G39662 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 7671236 ~ 7671642 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase arih1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU49465 | True | 407 | lncRNA | 0.50 | 1 | 7671236 | 7671642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012770 | NA | coding | downstream | 136797 | 7478394 ~ 7534439 (-) |
| AMCG00012769 | NA | coding | downstream | 280402 | 7387968 ~ 7390834 (-) |
| AMCG00012765 | NA | coding | downstream | 327782 | 7333745 ~ 7343454 (-) |
| AMCG00012764 | NA | coding | downstream | 338216 | 7321944 ~ 7333020 (-) |
| AMCG00012766 | NA | coding | downstream | 381544 | 7278702 ~ 7289692 (-) |
| AMCG00012772 | NA | coding | upstream | 30736 | 7702378 ~ 7719893 (-) |
| AMCG00012771 | kcnj8,irk8,LOC108279966,LOC106576596 | coding | upstream | 53846 | 7725488 ~ 7730823 (-) |
| AMCG00012774 | abcc9,LOC108233250 | coding | upstream | 63189 | 7734831 ~ 7742031 (-) |
| AMCG00012773 | LOC106576597 | coding | upstream | 85435 | 7757077 ~ 7787652 (-) |
| AMCG00012776 | NA | coding | upstream | 168727 | 7840369 ~ 7841180 (-) |
| G39580 | NA | non-coding | downstream | 520413 | 7150617 ~ 7150823 (-) |
| G39561 | NA | non-coding | downstream | 772999 | 6897987 ~ 6898237 (-) |
| G39546 | kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 | non-coding | downstream | 823840 | 6772968 ~ 6847396 (-) |
| G39556 | NA | non-coding | downstream | 875503 | 6786456 ~ 6795733 (-) |
| G39462 | NA | non-coding | downstream | 1383301 | 6285455 ~ 6287935 (-) |
| G39707 | NA | non-coding | upstream | 155636 | 7827278 ~ 7828147 (-) |
| G39839 | NA | non-coding | upstream | 597352 | 8268994 ~ 8269221 (-) |
| G39929 | NA | non-coding | upstream | 896410 | 8568052 ~ 8569889 (-) |
| G39952 | NA | non-coding | upstream | 988806 | 8660448 ~ 8667024 (-) |
| G40008 | NA | non-coding | upstream | 1228471 | 8900113 ~ 8901481 (-) |
| AMCG00012751 | NA | other | downstream | 975312 | 6638480 ~ 6695924 (-) |
| G39487 | NA | other | downstream | 1215058 | 6455721 ~ 6456178 (-) |
| AMCG00012732 | NA | other | downstream | 1607419 | 6052364 ~ 6063817 (-) |
| G38490 | NA | other | downstream | 5487073 | 2183885 ~ 2184163 (-) |
| G38458 | NA | other | downstream | 5894015 | 1776854 ~ 1777221 (-) |
| AMCG00012782 | NA | other | upstream | 219847 | 7891489 ~ 7904455 (-) |
| AMCG00012829 | NA | other | upstream | 1440799 | 9112441 ~ 9152405 (-) |
| AMCG00012858 | NA | other | upstream | 3068712 | 10740354 ~ 10753698 (-) |
| AMCG00012856 | lsm8,LOC107592220,LOC107580766,LOC107656302 | other | upstream | 3186239 | 10857881 ~ 10862322 (-) |
| AMCG00012888 | mkln1,LOC107104017 | other | upstream | 4568754 | 12240396 ~ 12271789 (-) |
