G39670 (kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834)


Basic Information

Item Value
gene id G39670
gene name kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7725488 ~ 7727828 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU49477
tatgTTCTTGTTGTACTCTGTGTCTTTATTGAGGCAGTGCTTTTTGtacatgaatgaaaataatatgaaaaataagtgtttattggttgttttgtttttgttttgcaacgAAAAAGCTTTCACTAAGGCCAATGTTTACAATGTGTTATAAGAGGGTAACATTTATTGcagtttacagcatttttttttttgtcttattggACTAGTGATTCAAGTTTTTAGTGGTgcattaaatattcaaacatcTGTTTTTTGGCATGTTTATTTGATAGTACAACACAGTGTGTATCACAGATTTGATAGATACAGTTGTAGTTTAATTACAATGAATATCAGATATCAGAATCTCTTCcaaagaattaaattaaaataattttcacaaaaataagGCACAGACTAGGTTTTTGCATATTTACCCTAAAATCAGATCCTTCTTGGTTATTTAAGGAAAGTGAGAAATAGGATATGAATTCTGCCAAAATGCAAACgatgaagaaaacatgtatgtatCTTGAGATTGTACTTGATCAACAATAAATATATCGAGGTTAAAAGAATCAAATTTGATTCTTGACCACCTACTTTATTGAGTTCTTTATTGCACTGCTGCTGATtgttatcattaaaaaataacaCATTGCAATTTGAAACAATCCCACAAACTGCATATACCCAgctgatcattttaaataaaatgccatgATCTCTTTACATACATACTAGTGCTGCAGTCATTGTTGTGAAGATGGACATGTGtaattactcaaaacacatttacaatattgttattttaataagcaaATATACTAAAGAAAACTTAGTAGTAAGAAAAATGTACCAGGTTCCTGGGGCTGGGGATTGTATTGACATATCCCCCCGATTGGACCAATAACATTCTTTTCTATTTTGGCCTCCCTGAACAGATTTACAGATATGCAGATAAGGAAGCCTTCTCACTAGCATAATAGCAGCCATACACATCCTCCTTTATCTTATctatttttacataaaacatttctgcaattgtaaaaaaaaagagaaaaaagctcTTTTCCCATAAATCTTTAAAAGCAGGACATGAGTGAAGGGTGCTTAAGTGAGTTTTAATGTAAGCGAGTGATAtcgaaaacacacacacacagacacacacacacagacaaaggtaagtaaaaacaaaaccagttttGAAATTAAGTAGGACTTCAAATGCACACAACTGAGGGCTTTTCTGCGAGAGCATCAGGCACCCTACTAGGAGGAAAAACACTTCTAACACCACACAGGAGTTCTGAGGTATCCTGAGGGTCCCAATGCAGCAGCAGTAGCAAAAGCAAGGTCCATGCTGCGTGTCATGTGTCTGACACGTTCTGGTTGCCCTCGGGTGTCAGGAACTGCACTTTGGGCACCATCAGCGAGGAGTTGTTCCGGCGGATGGAGTTGTTTCTCCTCATGGAGTTGTTGCGCCTCATGGAGTTCCTCTTGCGCAGGGAGTTCTGGTGGGAGAGCTCGCTCTTCTGCAGTGTCTGGATGAGGATGGAGGGCTTCTCGTCCAGCTCCCGGGCGCTGCAGCGCGGCGTCACCACCTTGGCGGTGTTCCCGAACTTGGAGTAGTCCACTGAGTACACCCCTTCCTCTTCGGTCACGATGGGCACAAAGCGGTGGCCCCACTGGATCTCCTCGGTCACGTAAGAGGTCCGGGCCTGGGTGGTGATGCCCGTGGTCTCCACCACcccttccaggatgacaatgatCTCCAGGTCGCTGCTCTGCAGGTCGCTGGCAGACAGGTCATAGAGGGGGCTGTTCTTATCGATGACGTGGCAGATGATGAGGGGGGCCAGCAGGAAGATGCTGTTGCTCTTAATGGGGCTCTCAGTCTGAATGTCGATCTGGTGGATGGGGATGACCTCCCCCTCAGGCGTGGTGGTCTTGCGCACCACCTGAAGCCTCACGGCCGCCCCGATGATCATGCTCTTGCGCAGGTCTCCCACCCGGAACATGAAGCATAGCCGGTTGTTGCGCACGGCGATGACAGCGTGCCGGCTGAAGATGAGTGTCTCTGCGCGCCGGTGGGACTGCGCCGTCTTCATAAAAATGCAGCCAAGCATGATGGCATTGATGATCAGCCCAGCGATGTTCTGCACGATCAGCACGGTGATGGCCGTGGGACACTGCTCTGTTATCATGCGCCCCCCGAAGCCAATGGTCACTTGCACCTCGATGGAGAATAGAAAGGCCGATGTGAATGACCTGTGTGAGAAACGGAAACGGAAGACGGTCAGGACAAGTTTGGAAACCACCCAGCTCACCAAGGAGCA

Function

symbol description
kcnj8 Predicted to enable ATP-activated inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Used to study hypertrichotic osteochondrodysplasia Cantu type. Orthologous to human KCNJ8 (potassium inwardly rectifying channel subfamily J member 8).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49477 True 2318 TUCP 0.44 2 7725488 7727828

Neighbor

gene id symbol gene type direction distance location
AMCG00012768 NA coding upstream 270082 7426981 ~ 7455406 (+)
AMCG00012767 parvb,LOC103134461 coding upstream 302715 7396579 ~ 7422773 (+)
AMCG00012761 lyrm5a,LOC106576136,LOC107658915,LOC107725960 coding upstream 432584 7290851 ~ 7292904 (+)
AMCG00012762 NA coding upstream 445830 7247162 ~ 7279658 (+)
AMCG00012756 etnk1,LOC106609326 coding upstream 882147 6823862 ~ 6843341 (+)
AMCG00012775 NA coding downstream 94144 7821972 ~ 7832788 (+)
AMCG00012777 NA coding downstream 134431 7862259 ~ 7864830 (+)
AMCG00012778 NA coding downstream 208552 7936380 ~ 7958975 (+)
AMCG00012786 NA coding downstream 306266 8034094 ~ 8034399 (+)
AMCG00012785 LOC103366393,LOC100698773,LOC102312910,LOC101485159,LOC102205266 coding downstream 313974 8041802 ~ 8077147 (+)
G39668 NA non-coding upstream 12245 7708867 ~ 7713243 (+)
G39586 NA non-coding upstream 507029 7213745 ~ 7218459 (+)
G39560 NA non-coding upstream 827258 6897997 ~ 6898230 (+)
G39538 NA non-coding upstream 963210 6761965 ~ 6762278 (+)
G39490 LOC103376870 non-coding upstream 1189095 6512648 ~ 6536393 (+)
G39737 NA non-coding downstream 178429 7906257 ~ 7909166 (+)
G39776 NA non-coding downstream 329191 8057019 ~ 8132564 (+)
G39838 NA non-coding downstream 541166 8268994 ~ 8269221 (+)
G39951 NA non-coding downstream 938926 8666754 ~ 8667464 (+)
G40022 NA non-coding downstream 1323259 9051087 ~ 9053819 (+)
AMCG00012763 NA other upstream 343929 7344450 ~ 7381559 (+)
AMCG00012748 itpr2,LOC100196824 other upstream 1207505 6476249 ~ 6517983 (+)
AMCG00012734 NA other upstream 1668656 6053148 ~ 6056832 (+)
AMCG00012718 NA other upstream 1901973 5807846 ~ 5823515 (+)
G39297 NA other upstream 2172721 5552417 ~ 5552767 (+)
G39709 LOC101154678 other downstream 107518 7835346 ~ 7836214 (+)
AMCG00012797 NA other downstream 608070 8335898 ~ 8345855 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other downstream 808405 8536233 ~ 8569891 (+)
AMCG00012818 NA other downstream 1355834 9083662 ~ 9085700 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other downstream 1384632 9112460 ~ 9130211 (+)

Expression


Co-expression Network