G39737


Basic Information

Item Value
gene id G39737
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7906257 ~ 7909166 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU49569
catacatacactatatgcagtcaaactacatttaaaaacataactgcaattaaaaggtgtttgttttttcttttacacatcAAAACAAAGTGTTACTGATCTTTATCTTTACCAAAATCCCATACAACGTGTGTTCCTAATACATtatccaaaaataaatgcaaaacccCACACTAATGTAATTtccataatttacatttaatatttctcaagaagaaagagaaaaagaaaaagcacggCAGCATGTCTGTGATCAAAAGCTCAATgattactgtacattttctggAGTAAGGTGACAGTTATTAAAGTTCAAACAATTTGAATgagaaaatgaacaaagaaCCATAAAATTATACGTTTGCCATGTGCCTATTAAACCTGTAGatttaacatgaaaaaataatgttatgtaCAAGTAACAGGAAATCATACAGGAAAGTGTCATAGCAATGTTCAgttattatacacatttatttaaatcacagcattcatttgacaaagaaataattGAAAGTATAGTATAAATTAAGTCTtcaattcaaatgcaaaagaaaCTCCCAATTTGGTACTCTATTTGTTCAAAGATTCGTTGTTATATACATgcgaaaatacttttttctttaaaatatatatttgtgaaacaTTCATTCTGTGGTTTTTGCTGTTACTTTCACCATCTTATACTACAATTTTCAAAAGTGATGACAAGTGCCATTTCTATCTTCCAGTGCtaactttaataaatattgtatctTAAAGAGAGATTAAACCGGTATTTcttttgagagtgtgtgtgtgtaagtatatatatatatatatatatatatcccaggaatatattattatgagAAACAGAGCCATTATTTGTCTGCACAGGACAGTAAGAGATTAgcaaagtctttaaaaaaaaataagattaacaTTGAATCAATTCCAAATACTATACAACCCACACCAGACTCCATTGTTAAAAGAATGCAGTCCAAACATCTACAATCAATCTGTACAGGAAGTGTATATACACTGTCACTGGAATCCTGTACATGGTGAAGACTACTACCAGAAAGGAATAGAAACAACTATAATCACAATccctacaaattaaaaatgtaacggTTTAAAACTATACTGACAACTGACCTTATGATGTCCTTCTCACAACCCCAAACACGCTGGAGCCGATTCAGAAAAAAGCTTAACTCGGATGGATTTGCCAGTGGAATAATTGATTCCAATAATGACCTCAAAAGTAGATGACCCTCTTTGTACTTCAAAACAGTTCTACATGGTGCACTAATCTAGTAACATAGTGCATTGAGAGAAAAAGTTATTTCAatcataaaatcatatttacaagGCCCAGCATATGAAGGCAAATATCAGGCTCTGTGCTCATGGTCACAACTAGATCCTACCTCTTTATTGTGGATTATTGTCATTGATCGGATTACAGTAAAGTTTAATCCATGTCCTTTCaccattgtttcttttctttttcttgtttttggtcAATACGTTTCTTCTgcttttatattgtattcaatGTTAAACCTTGATTAGACATTTTCTCCCAACATTCTGTTGTAGCACCTCTGAAAGATCTGACCGAAATGAGTGCAGTCTTCGGTACTCAGTCTGCACATAGTTCACTGTTCCACCTCTGCCCTGGGAAGATTAACAGGAGGCTAAATAATACAggatatctttaaaatatttgctttctgTTACTGGATTGCTTCCACGTAGTTCGCTGGGTACAGGCCAACCGTGCCGTCCTTCAGGCGTCCCTTACACCATCCTTGTTCGTCCTCGTTTCCTATCTTGGTCATCTCATCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49569 True 1838 lncRNA 0.33 2 7906257 7909166

Neighbor

gene id symbol gene type direction distance location
AMCG00012777 NA coding upstream 41427 7862259 ~ 7864830 (+)
AMCG00012775 NA coding upstream 73469 7821972 ~ 7832788 (+)
AMCG00012768 NA coding upstream 450851 7426981 ~ 7455406 (+)
AMCG00012767 parvb,LOC103134461 coding upstream 483484 7396579 ~ 7422773 (+)
AMCG00012761 lyrm5a,LOC106576136,LOC107658915,LOC107725960 coding upstream 613353 7290851 ~ 7292904 (+)
AMCG00012778 NA coding downstream 27214 7936380 ~ 7958975 (+)
AMCG00012786 NA coding downstream 124928 8034094 ~ 8034399 (+)
AMCG00012785 LOC103366393,LOC100698773,LOC102312910,LOC101485159,LOC102205266 coding downstream 132636 8041802 ~ 8077147 (+)
AMCG00012798 NA coding downstream 533238 8442404 ~ 8443642 (+)
AMCG00012807 NA coding downstream 662292 8571458 ~ 8607377 (+)
G39669 NA non-coding upstream 170989 7714497 ~ 7735268 (+)
G39668 NA non-coding upstream 193014 7708867 ~ 7713243 (+)
G39586 NA non-coding upstream 687798 7213745 ~ 7218459 (+)
G39560 NA non-coding upstream 1008027 6897997 ~ 6898230 (+)
G39538 NA non-coding upstream 1143979 6761965 ~ 6762278 (+)
G39776 NA non-coding downstream 147853 8057019 ~ 8132564 (+)
G39838 NA non-coding downstream 359828 8268994 ~ 8269221 (+)
G39951 NA non-coding downstream 757588 8666754 ~ 8667464 (+)
G40022 NA non-coding downstream 1141921 9051087 ~ 9053819 (+)
G40041 NA non-coding downstream 1182148 9091314 ~ 9093846 (+)
G39709 LOC101154678 other upstream 70043 7835346 ~ 7836214 (+)
G39670 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 other upstream 178429 7725488 ~ 7727828 (+)
AMCG00012763 NA other upstream 524698 7344450 ~ 7381559 (+)
AMCG00012748 itpr2,LOC100196824 other upstream 1388274 6476249 ~ 6517983 (+)
AMCG00012734 NA other upstream 1849425 6053148 ~ 6056832 (+)
AMCG00012797 NA other downstream 426732 8335898 ~ 8345855 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other downstream 627067 8536233 ~ 8569891 (+)
AMCG00012818 NA other downstream 1174496 9083662 ~ 9085700 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other downstream 1203294 9112460 ~ 9130211 (+)
G40224 NA other downstream 2527741 10436907 ~ 10444447 (+)

Expression


Co-expression Network