G39776


Basic Information

Item Value
gene id G39776
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8057019 ~ 8132564 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU49633
atatatatatatatatatatatatatatatatatatacacatacatatacacacatacacacttgccaaaaaaatgcaatatttacttcacaacatcataataataatcaaaccaAGGTATGCATGCACACAATTCCCATTTATCCTGTTGTTTCTTCAATCTGTATGTACATCTCTGTGCAGATTTCCACagcaaagaaaactaaacaaaaataaagcaaaaaatgtaGCCACTGATGGTAAAGATGAATCACTGCATCACTGACAACAGATGCAGTCATTTACGCATCCTTATAGACTTCATCACAATATGTATCGCATGTATGGTAATCAGAACTTTTTGAGGGAAACCTGCAAAAGTACAGGAAAATAGCAATCATATTATAGAATAACTAAGATTGTAGGAGTTCTTTAataagatgtttgttttttaaatcttctgataaaaacaaaaaagaaaacaacataaaatgacATTTCCCAAATactctcaaaataaaaatatattctggtACAAATTAGACACTTAATATTACAATCATTGCACAAAGATCTGGAATTTTTATTCTGGATTCTTGTTTACATTCCACCAGAAGATTCTCTTTAAATAACGAAACGCTGGGCATATCTTCAACTTTGAAGTAGGATTTTGTGGTCATGAATTcacaggaaagaaaaagtgATGCAAATGTGTGAAGCATTACATTCATGattttcacagacacacacatacataaaaccaGAAAGAAGAGTCACATTCTGACAAAATCATTTCAAAGAATACTATAATGACTTACAAGGAAACAAATATAGTGCCCCAGCTGTATTGTGGTACAGTAGTTGTAGTGGATAATTTTACGAAAATTTGGTCTATTGACAGTTTCATTAAACTCGAAAAGGACTGATCCTCATTGATGTTCTCactaaaaagataaaaaataataataataataataatctcttcATAAAAATTTAATTACCAGGTGCAGAAAAGCcataattttgtcattttgtttcaaGGTATTGATATACTGTAATCAGAGAAATCTAACTGCAGATTTACTTTAAAGCTTATCCATACTTGACCGTGACAAACTGCCAGCATGTTTCTTCTCCAGTCCAGACACCCAGAGATGTCTGTTCCCCGCCCATCCAGAACGCGCACAAGAACCAAACACTTAATAACTCTGGCCCAGGAGCCTTTCTTCctcaagcagcagcagcagcttggTCTTCCTGGGGCTTGGCTGCTCTCTTTGTGGTCTCTGTTCCTGGGACTGTTTCTTCAGGAAACGCTGTGTCCCTGTTACCCCTGCAGCTTCTTTTCCAAGCGGTCTAGTTTGGCCAGGTTCTCCTTCAGGAGCTTGCTGCCCGGGGAAAGCTGCAAGGCCTTTTCGTAGTACTTGCGCGCTGCCACGTAGTCTCCCTGCACAGACATGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49633 True 1443 lncRNA 0.36 2 8057019 8132564

Neighbor

gene id symbol gene type direction distance location
AMCG00012786 NA coding upstream 22620 8034094 ~ 8034399 (+)
AMCG00012778 NA coding upstream 98044 7936380 ~ 7958975 (+)
AMCG00012777 NA coding upstream 192189 7862259 ~ 7864830 (+)
AMCG00012775 NA coding upstream 224231 7821972 ~ 7832788 (+)
AMCG00012768 NA coding upstream 601613 7426981 ~ 7455406 (+)
AMCG00012798 NA coding downstream 309840 8442404 ~ 8443642 (+)
AMCG00012807 NA coding downstream 438894 8571458 ~ 8607377 (+)
AMCG00012811 LOC106584661,LOC105006114,LOC108420373,LOC107716646 coding downstream 662604 8795168 ~ 8799438 (+)
AMCG00012810 aldh1l2,LOC106576152,LOC106609325,LOC107743541 coding downstream 690933 8823497 ~ 8844351 (+)
AMCG00012815 NA coding downstream 721517 8854081 ~ 8872158 (+)
G39737 NA non-coding upstream 147853 7906257 ~ 7909166 (+)
G39669 NA non-coding upstream 321751 7714497 ~ 7735268 (+)
G39668 NA non-coding upstream 343776 7708867 ~ 7713243 (+)
G39586 NA non-coding upstream 838560 7213745 ~ 7218459 (+)
G39560 NA non-coding upstream 1158789 6897997 ~ 6898230 (+)
G39838 NA non-coding downstream 136430 8268994 ~ 8269221 (+)
G39951 NA non-coding downstream 534190 8666754 ~ 8667464 (+)
G40022 NA non-coding downstream 918523 9051087 ~ 9053819 (+)
G40041 NA non-coding downstream 958750 9091314 ~ 9093846 (+)
G40119 NA non-coding downstream 1132314 9264878 ~ 9265093 (+)
G39709 LOC101154678 other upstream 220805 7835346 ~ 7836214 (+)
G39670 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 other upstream 329191 7725488 ~ 7727828 (+)
AMCG00012763 NA other upstream 675460 7344450 ~ 7381559 (+)
AMCG00012748 itpr2,LOC100196824 other upstream 1539036 6476249 ~ 6517983 (+)
AMCG00012734 NA other upstream 2000187 6053148 ~ 6056832 (+)
AMCG00012797 NA other downstream 203334 8335898 ~ 8345855 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other downstream 403669 8536233 ~ 8569891 (+)
AMCG00012818 NA other downstream 951098 9083662 ~ 9085700 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other downstream 979896 9112460 ~ 9130211 (+)
G40224 NA other downstream 2304343 10436907 ~ 10444447 (+)

Expression


Co-expression Network