G40145


Basic Information

Item Value
gene id G40145
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 9473545 ~ 9473868 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU50049
attgtgtaggtcccccttttgccgccaaaacagccctgacccgttgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaaaacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcatgtgcccattgtaggcgctttcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50049 True 324 lncRNA 0.53 1 9473545 9473868

Neighbor

gene id symbol gene type direction distance location
AMCG00012833 NA coding upstream 4297 9412326 ~ 9469248 (+)
AMCG00012832 NA coding upstream 91044 9375167 ~ 9382501 (+)
AMCG00012828 btg1,LOC106609569 coding upstream 218990 9251194 ~ 9254555 (+)
AMCG00012819 NA coding upstream 361769 9095412 ~ 9111776 (+)
AMCG00012816 NA coding upstream 395644 9064317 ~ 9077901 (+)
AMCG00012834 NA coding downstream 160366 9634234 ~ 9691339 (+)
AMCG00012835 NA coding downstream 228402 9702270 ~ 9723930 (+)
AMCG00012836 snd1,LOC107738807 coding downstream 277768 9751636 ~ 9770671 (+)
AMCG00012838 snd1,LOC102797100 coding downstream 409256 9883124 ~ 10314250 (+)
AMCG00012839 NA coding downstream 935459 10409327 ~ 10410281 (+)
G40121 NA non-coding upstream 178903 9294331 ~ 9294642 (+)
G40119 NA non-coding upstream 208452 9264878 ~ 9265093 (+)
G40041 NA non-coding upstream 379699 9091314 ~ 9093846 (+)
G40022 NA non-coding upstream 419726 9051087 ~ 9053819 (+)
G39951 NA non-coding upstream 806081 8666754 ~ 8667464 (+)
G40146 NA non-coding downstream 105 9473973 ~ 9474220 (+)
G40203 NA non-coding downstream 698386 10172254 ~ 10172463 (+)
G40214 NA non-coding downstream 901163 10375031 ~ 10424371 (+)
G40303 NA non-coding downstream 1266564 10740432 ~ 10743104 (+)
G40436 NA non-coding downstream 1629957 11103825 ~ 11159087 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 343334 9112460 ~ 9130211 (+)
AMCG00012818 NA other upstream 387845 9083662 ~ 9085700 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other upstream 903654 8536233 ~ 8569891 (+)
AMCG00012797 NA other upstream 1127690 8335898 ~ 8345855 (+)
G39709 LOC101154678 other upstream 1637331 7835346 ~ 7836214 (+)
G40224 NA other downstream 963039 10436907 ~ 10444447 (+)
AMCG00012848 NA other downstream 1066860 10540728 ~ 10541960 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other downstream 2979371 12453239 ~ 12500402 (+)
G40629 NA other downstream 3014707 12488575 ~ 12535929 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 4954445 14428313 ~ 14433201 (+)

Expression


Co-expression Network