Gene
RNA
| Item | Value |
|---|---|
| gene id | G40203 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 10172254 ~ 10172463 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04120 | Ubiquitin mediated proteolysis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU50116 | True | 210 | lncRNA | 0.50 | 1 | 10172254 | 10172463 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012836 | snd1,LOC107738807 | coding | upstream | 401583 | 9751636 ~ 9770671 (+) |
| AMCG00012835 | NA | coding | upstream | 448324 | 9702270 ~ 9723930 (+) |
| AMCG00012834 | NA | coding | upstream | 480915 | 9634234 ~ 9691339 (+) |
| AMCG00012833 | NA | coding | upstream | 703006 | 9412326 ~ 9469248 (+) |
| AMCG00012832 | NA | coding | upstream | 789753 | 9375167 ~ 9382501 (+) |
| AMCG00012839 | NA | coding | downstream | 236864 | 10409327 ~ 10410281 (+) |
| AMCG00012843 | NA | coding | downstream | 299402 | 10471865 ~ 10492477 (+) |
| AMCG00012844 | NA | coding | downstream | 359516 | 10531979 ~ 10534605 (+) |
| AMCG00012850 | calua,LOC108432523 | coding | downstream | 374088 | 10546551 ~ 10550066 (+) |
| AMCG00012849 | tnpo3,LOC106609131 | coding | downstream | 417735 | 10590198 ~ 10608349 (+) |
| G40146 | NA | non-coding | upstream | 698034 | 9473973 ~ 9474220 (+) |
| G40145 | NA | non-coding | upstream | 698386 | 9473545 ~ 9473868 (+) |
| G40121 | NA | non-coding | upstream | 877612 | 9294331 ~ 9294642 (+) |
| G40119 | NA | non-coding | upstream | 907161 | 9264878 ~ 9265093 (+) |
| G40041 | NA | non-coding | upstream | 1078408 | 9091314 ~ 9093846 (+) |
| G40214 | NA | non-coding | downstream | 202568 | 10375031 ~ 10424371 (+) |
| G40303 | NA | non-coding | downstream | 567969 | 10740432 ~ 10743104 (+) |
| G40436 | NA | non-coding | downstream | 931362 | 11103825 ~ 11159087 (+) |
| G40496 | LOC103376870 | non-coding | downstream | 1121754 | 11294217 ~ 11354359 (+) |
| G40498 | NA | non-coding | downstream | 1232542 | 11405005 ~ 11405356 (+) |
| AMCG00012820 | nt5dc3,LOC102307862,LOC107753643 | other | upstream | 1042043 | 9112460 ~ 9130211 (+) |
| AMCG00012818 | NA | other | upstream | 1086554 | 9083662 ~ 9085700 (+) |
| AMCG00012803 | sult4a1,LOC102784496,LOC106576158 | other | upstream | 1602363 | 8536233 ~ 8569891 (+) |
| AMCG00012797 | NA | other | upstream | 1826399 | 8335898 ~ 8345855 (+) |
| G39709 | LOC101154678 | other | upstream | 2336040 | 7835346 ~ 7836214 (+) |
| G40224 | NA | other | downstream | 264444 | 10436907 ~ 10444447 (+) |
| AMCG00012848 | NA | other | downstream | 368265 | 10540728 ~ 10541960 (+) |
| AMCG00012894 | gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 | other | downstream | 2280776 | 12453239 ~ 12500402 (+) |
| G40629 | NA | other | downstream | 2316112 | 12488575 ~ 12535929 (+) |
| G40999 | metap2,LOC108428789,LOC100194705 | other | downstream | 4255850 | 14428313 ~ 14433201 (+) |
