Gene
RNA
| Item | Value |
|---|---|
| gene id | G40214 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 10375031 ~ 10424371 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU50128 | True | 995 | lncRNA | 0.34 | 2 | 10375031 | 10424371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012838 | snd1,LOC102797100 | coding | upstream | 60781 | 9883124 ~ 10314250 (+) |
| AMCG00012836 | snd1,LOC107738807 | coding | upstream | 604360 | 9751636 ~ 9770671 (+) |
| AMCG00012835 | NA | coding | upstream | 651101 | 9702270 ~ 9723930 (+) |
| AMCG00012834 | NA | coding | upstream | 683692 | 9634234 ~ 9691339 (+) |
| AMCG00012833 | NA | coding | upstream | 905783 | 9412326 ~ 9469248 (+) |
| AMCG00012843 | NA | coding | downstream | 47494 | 10471865 ~ 10492477 (+) |
| AMCG00012844 | NA | coding | downstream | 107608 | 10531979 ~ 10534605 (+) |
| AMCG00012850 | calua,LOC108432523 | coding | downstream | 122180 | 10546551 ~ 10550066 (+) |
| AMCG00012849 | tnpo3,LOC106609131 | coding | downstream | 165827 | 10590198 ~ 10608349 (+) |
| AMCG00012859 | NA | coding | downstream | 242389 | 10666760 ~ 10685175 (+) |
| G40203 | NA | non-coding | upstream | 202568 | 10172254 ~ 10172463 (+) |
| G40146 | NA | non-coding | upstream | 900811 | 9473973 ~ 9474220 (+) |
| G40145 | NA | non-coding | upstream | 901163 | 9473545 ~ 9473868 (+) |
| G40121 | NA | non-coding | upstream | 1080389 | 9294331 ~ 9294642 (+) |
| G40119 | NA | non-coding | upstream | 1109938 | 9264878 ~ 9265093 (+) |
| G40303 | NA | non-coding | downstream | 316061 | 10740432 ~ 10743104 (+) |
| G40436 | NA | non-coding | downstream | 679454 | 11103825 ~ 11159087 (+) |
| G40496 | LOC103376870 | non-coding | downstream | 869846 | 11294217 ~ 11354359 (+) |
| G40498 | NA | non-coding | downstream | 980634 | 11405005 ~ 11405356 (+) |
| G40497 | exoc4,LOC107744930,LOC107725510,LOC107585070 | non-coding | downstream | 1041850 | 11466221 ~ 11468218 (+) |
| AMCG00012820 | nt5dc3,LOC102307862,LOC107753643 | other | upstream | 1244820 | 9112460 ~ 9130211 (+) |
| AMCG00012818 | NA | other | upstream | 1289331 | 9083662 ~ 9085700 (+) |
| AMCG00012803 | sult4a1,LOC102784496,LOC106576158 | other | upstream | 1805140 | 8536233 ~ 8569891 (+) |
| AMCG00012797 | NA | other | upstream | 2029176 | 8335898 ~ 8345855 (+) |
| G39709 | LOC101154678 | other | upstream | 2538817 | 7835346 ~ 7836214 (+) |
| G40224 | NA | other | downstream | 12536 | 10436907 ~ 10444447 (+) |
| AMCG00012848 | NA | other | downstream | 116357 | 10540728 ~ 10541960 (+) |
| AMCG00012894 | gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 | other | downstream | 2028868 | 12453239 ~ 12500402 (+) |
| G40629 | NA | other | downstream | 2064204 | 12488575 ~ 12535929 (+) |
| G40999 | metap2,LOC108428789,LOC100194705 | other | downstream | 4003942 | 14428313 ~ 14433201 (+) |
