G40989


Basic Information

Item Value
gene id G40989
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14397597 ~ 14397855 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51080
GCTGAATGGCTTTGACCAATCACAGAAGCCTAGTGTggctgaaaggaaaacaaagtcaCTTAAGCCATGCTCCTGgcctgaacaaaaacaaaaaaaaaagttgtattatCTCACATTAGCAAACACTTAGTAATGTCACAAATAAGCACAGGAAAGCTTTTGTATCAAAATTGGCAATGGCTGTGAGGATTTCAGATTGTATTTAGTTTGCTAAGGTATAACAAACTTTCCTGCCTGTATACTGAATCATAGATCATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51080 True 259 lncRNA 0.37 1 14397597 14397855

Neighbor

gene id symbol gene type direction distance location
AMCG00012934 NA coding upstream 2528 14366098 ~ 14395069 (+)
AMCG00012928 NA coding upstream 56695 14332782 ~ 14340902 (+)
AMCG00012930 hal,LOC103041200,LOC107670217,LOC107740873,LOC108275357,LOC102785645 coding upstream 72724 14315841 ~ 14324873 (+)
AMCG00012929 lta4h coding upstream 84368 14299408 ~ 14313229 (+)
AMCG00012926 cdk17,LOC107658862,LOC107656329 coding upstream 138434 14228638 ~ 14259163 (+)
AMCG00012935 NA coding downstream 7703 14405558 ~ 14419258 (+)
AMCG00012936 NA coding downstream 35948 14433803 ~ 14451103 (+)
AMCG00012939 LOC103459300,LOC104941780 coding downstream 81221 14479076 ~ 14510489 (+)
AMCG00012942 NA coding downstream 176738 14574593 ~ 14580228 (+)
AMCG00012941 NA coding downstream 254989 14652844 ~ 14681647 (+)
G40986 NA non-coding upstream 1698 14395576 ~ 14395899 (+)
G40963 NA non-coding upstream 53116 14340946 ~ 14344481 (+)
G40920 NA non-coding upstream 211461 14185240 ~ 14186136 (+)
G40846 NA non-coding upstream 409509 13986950 ~ 13988088 (+)
G40824 NA non-coding upstream 512408 13883261 ~ 13885189 (+)
G41054 NA non-coding downstream 227397 14625252 ~ 14625850 (+)
G41058 NA non-coding downstream 230728 14628583 ~ 14630610 (+)
G41075 NA non-coding downstream 277210 14675065 ~ 14677245 (+)
G41082 NA non-coding downstream 292255 14690110 ~ 14690674 (+)
G41084 NA non-coding downstream 307105 14704960 ~ 14705185 (+)
G40629 NA other upstream 1861668 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 1897195 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 3855637 10540728 ~ 10541960 (+)
G40224 NA other upstream 3953150 10436907 ~ 10444447 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 5267386 9112460 ~ 9130211 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 30458 14428313 ~ 14433201 (+)
AMCG00012940 LOC107748465 other downstream 118928 14516783 ~ 14529806 (+)
G41059 NA other downstream 234502 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 683564 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 900107 15297962 ~ 15317344 (+)

Expression


Co-expression Network