G41030


Basic Information

Item Value
gene id G41030
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14508557 ~ 14510685 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51133
cttttttctttcatcgttgtccattttatttctgtcaccCTTACACCTTACAGTGACTCCAATAAGTGTACAAACAGCTGGTGTACAATTGACTGGAATTGCCTTGCAAGTACTTTGCTAGATATTGGGCCATCACAATCTTTGTAACAGGAGTGAAGGAAGTGCTTCAGTATCAAACATCACATTCAAACCATTCTCATCTCTAGTAGTTAAtctagtgaaaaaaaaaaaagtgaaataaataaattgtggtCCAAGTGACAAACTAGATCtatggagagaagaaaaacagttcaaaactataacaaaatgttttaagacAGCAAGTGTAAAGGAGACAGTATGATCTCAACCAAATACTTGTTCAGAGAGTTTTTATACATTGGTCTGTACAAACGCATGTAGTGATACATGAATGACACGGAATTAACCCACCCGCATGGATTGTCTTTCCAAAATTTCCATCTATACAGCATAGTGCAATCCATGATGGTCAAATTAGCAAGTGTAAATACAAGATGTAAACAGTcctatacaatttaaaaacaaaaaacaaagtataaatacattacagataATTACATCggctgggtttaaaaaaaaaaaaaaggaaattcaggTGCTGGTGTTGCTCAGAATAGCCCAATGAATGTAGAACACAAACTTATTCGACCAGACATCTTCAGCTTTCTCCCTTCAGGCGGCACACTTAAGAATAATttagtaacattaaaaaaaataaaaaagtctgcTTAGAGCTCTCTTAGATCAAGGAACATCCCATCCTTGTCAATGTCAAATTTCAAATACCCTGCAGTTAGGAatatcaaaaaaacaaatcatagtATGCCATTTTCCAAGgggtttaaaaacaatataatggtTATATACCATTATATTGAAGTGGAAACAAAACCACTGGCACTGCAGAGTATTACAGACAGGATCCGTATACCTGCAGATGCGATTCTCATAGGAAGTGGCGATGGCATTCCTACGAGTCAGAACTACAGAGGGCTACTGGATTAAGTGGTCTGCAAGGTATTCTTCCTTTTCCTGAGAGTGGGACATTACAACACATCCACCTGCATACTATCCACCTGACCAAGTCCACTTGGGTTAGTCCGCAGAGCACCTGACACTGAAGCAGCACTCATACGGTCAGCAAACTTCATGATCGTCTTTTTACACAACCATAAGCCACCTGGgcctacatttaaaatatgaaattagaTAAAGagttctaaaataaaacaaaaacagccatgAGTGCTGCTTACTTTGAATTATGTACATGTACACTATATCCTAAAGCACCAGGAAATGGCAAGTGCATTGTAGTCTAGGAAGAAGGCTTAAATAGGCTTAAAGGCACCAAGTGATTTCACTGCCAAGTGTCTCACAGCTAATACTGGGTATACATTGAATAGAGGACCTGGGGAAGCTATAAAAGAACAGCCTGCCTTTATGTTCCTCCACTGTCAGAACCCCACGGTTGTCACATGTCTGAATATGTACAAGAGGGGAGACATCACTAAAAATGACTTTTTGCGAGCCACCACGACCACAAACGCCTCCGTGTCTGTGCAGTGGTCATGAAGGCCGGTGTCCGTGCAGAGGAATGCTGTGCGCTGGTTTCGTCAGTCCTGTATGCGACCACAGCCTTACAGGACAGTGGCTTCTTGAAAAGCTTCCATCCACCTGTGGAAAccgcagaaaaacaaacaaaaccaaaatcaatatGTAACTATAGCATCACTGAAATGCCCATGGGTCTGGTACGTCATATGCTTACAACTTCACTTTTGCATCTTCACACATTTGTTGACATTTTACCCCCAAAGTTCTATATCCTGAATTAAATTTTCTAAGGTCACCGTTCAGTTCAAAATCTGCAGAGTATTGTACCTGATTCCCGAGCTACAGGTTGATTCTTAGCAGGATGCCCAGTTGATGCAAAGCAATAAACTAGGATATTGATGTGTGAGCAGTTTGCTTTAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51133 True 2002 lncRNA 0.39 2 14508557 14510685

Neighbor

gene id symbol gene type direction distance location
AMCG00012937 NA coding downstream 33976 14452415 ~ 14474581 (-)
AMCG00012938 metap2 coding downstream 75401 14424811 ~ 14433156 (-)
AMCG00012932 NA coding downstream 176755 14326065 ~ 14331802 (-)
AMCG00012933 NA coding downstream 227836 14262518 ~ 14280721 (-)
AMCG00012927 phyh,LOC103369277,LOC102790656,LOC103375892 coding downstream 318470 14186362 ~ 14190087 (-)
AMCG00012944 NA coding upstream 164400 14675085 ~ 14702602 (-)
AMCG00012943 socs2,LOC107590271,LOC107732999 coding upstream 247116 14757801 ~ 14772607 (-)
AMCG00012948 NA coding upstream 284357 14795042 ~ 14796838 (-)
AMCG00012955 tspan12,LOC102782178,LOC108228819 coding upstream 541278 15051963 ~ 15065613 (-)
AMCG00012956 NA coding upstream 567413 15078098 ~ 15079375 (-)
G40967 NA non-coding downstream 168747 14339348 ~ 14339810 (-)
G40966 NA non-coding downstream 169329 14338914 ~ 14339228 (-)
G40941 NA non-coding downstream 211781 14296574 ~ 14296776 (-)
G40903 NA non-coding downstream 402287 14099946 ~ 14106270 (-)
G40892 NA non-coding downstream 521845 13985178 ~ 13986712 (-)
G41020 LOC107748465 non-coding upstream 17469 14528154 ~ 14529773 (-)
G41047 NA non-coding upstream 77160 14587845 ~ 14588126 (-)
G41088 NA non-coding upstream 206549 14717234 ~ 14717564 (-)
G41102 NA non-coding upstream 223050 14733735 ~ 14736629 (-)
G41138 NA non-coding upstream 331558 14842243 ~ 14922316 (-)
AMCG00012931 snrpf other downstream 164085 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 1393070 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 1602224 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 2236768 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 3646235 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 1208828 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 2119546 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 3369540 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 3419213 17929898 ~ 18046714 (-)
G41807 NA other upstream 3665376 18176061 ~ 18191522 (-)

Expression


Co-expression Network