Gene
RNA
| Item | Value |
|---|---|
| gene id | G41047 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 14587845 ~ 14588126 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51152 | True | 282 | lncRNA | 0.41 | 1 | 14587845 | 14588126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012937 | NA | coding | downstream | 113264 | 14452415 ~ 14474581 (-) |
| AMCG00012938 | metap2 | coding | downstream | 154689 | 14424811 ~ 14433156 (-) |
| AMCG00012932 | NA | coding | downstream | 256043 | 14326065 ~ 14331802 (-) |
| AMCG00012933 | NA | coding | downstream | 307124 | 14262518 ~ 14280721 (-) |
| AMCG00012927 | phyh,LOC103369277,LOC102790656,LOC103375892 | coding | downstream | 397758 | 14186362 ~ 14190087 (-) |
| AMCG00012944 | NA | coding | upstream | 86959 | 14675085 ~ 14702602 (-) |
| AMCG00012943 | socs2,LOC107590271,LOC107732999 | coding | upstream | 169675 | 14757801 ~ 14772607 (-) |
| AMCG00012948 | NA | coding | upstream | 206916 | 14795042 ~ 14796838 (-) |
| AMCG00012955 | tspan12,LOC102782178,LOC108228819 | coding | upstream | 463837 | 15051963 ~ 15065613 (-) |
| AMCG00012956 | NA | coding | upstream | 489972 | 15078098 ~ 15079375 (-) |
| G41020 | LOC107748465 | non-coding | downstream | 58072 | 14528154 ~ 14529773 (-) |
| G41030 | NA | non-coding | downstream | 77160 | 14508557 ~ 14510685 (-) |
| G40967 | NA | non-coding | downstream | 248035 | 14339348 ~ 14339810 (-) |
| G40966 | NA | non-coding | downstream | 248617 | 14338914 ~ 14339228 (-) |
| G40941 | NA | non-coding | downstream | 291069 | 14296574 ~ 14296776 (-) |
| G41088 | NA | non-coding | upstream | 129108 | 14717234 ~ 14717564 (-) |
| G41102 | NA | non-coding | upstream | 145609 | 14733735 ~ 14736629 (-) |
| G41138 | NA | non-coding | upstream | 254117 | 14842243 ~ 14922316 (-) |
| G41191 | NA | non-coding | upstream | 487308 | 15075434 ~ 15077820 (-) |
| G41224 | NA | non-coding | upstream | 647494 | 15235620 ~ 15235862 (-) |
| AMCG00012931 | snrpf | other | downstream | 243373 | 14340416 ~ 14344472 (-) |
| G40778 | LOC107575789 | other | downstream | 1472358 | 13114893 ~ 13115487 (-) |
| AMCG00012906 | kin | other | downstream | 1681512 | 12896520 ~ 12906333 (-) |
| AMCG00012888 | mkln1,LOC107104017 | other | downstream | 2316056 | 12240396 ~ 12271789 (-) |
| AMCG00012856 | lsm8,LOC107592220,LOC107580766,LOC107656302 | other | downstream | 3725523 | 10857881 ~ 10862322 (-) |
| AMCG00012985 | NA | other | upstream | 1131387 | 15719513 ~ 15722457 (-) |
| AMCG00013018 | NA | other | upstream | 2042105 | 16630231 ~ 16639087 (-) |
| AMCG00013038 | NA | other | upstream | 3292099 | 17880225 ~ 17910017 (-) |
| AMCG00013042 | NA | other | upstream | 3341772 | 17929898 ~ 18046714 (-) |
| G41807 | NA | other | upstream | 3587935 | 18176061 ~ 18191522 (-) |
