G41054


Basic Information

Item Value
gene id G41054
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14625252 ~ 14625850 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51159
GTGAGGACCGTGTGTGTGGCTCTGAGGGACGGCAGCTGTTATGGGTCTGTTCAAATGACCGTTAAATCTCTGCCGTCCTGCCAAAGCATATCCCCAAGGACCACGTGGGCCAGTGGGAAAAGAGGGATAATGATTGTTGGACAGGACCTTCATTTGGTGGACTCGGTGAAAACTGGACATAATTATCAGGTGTACAGTTATTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51159 True 204 lncRNA 0.50 2 14625252 14625850

Neighbor

gene id symbol gene type direction distance location
AMCG00012942 NA coding upstream 45024 14574593 ~ 14580228 (+)
AMCG00012939 LOC103459300,LOC104941780 coding upstream 114763 14479076 ~ 14510489 (+)
AMCG00012936 NA coding upstream 174149 14433803 ~ 14451103 (+)
AMCG00012935 NA coding upstream 205994 14405558 ~ 14419258 (+)
AMCG00012934 NA coding upstream 230183 14366098 ~ 14395069 (+)
AMCG00012941 NA coding downstream 26994 14652844 ~ 14681647 (+)
AMCG00012947 NA coding downstream 154715 14780565 ~ 14793388 (+)
AMCG00012946 NA coding downstream 171862 14797712 ~ 14811683 (+)
AMCG00012945 NA coding downstream 208640 14834490 ~ 14851076 (+)
AMCG00012949 LOC108428177 coding downstream 252912 14878762 ~ 14922962 (+)
G40989 NA non-coding upstream 227397 14397597 ~ 14397855 (+)
G40986 NA non-coding upstream 229353 14395576 ~ 14395899 (+)
G40963 NA non-coding upstream 280771 14340946 ~ 14344481 (+)
G40920 NA non-coding upstream 439116 14185240 ~ 14186136 (+)
G40846 NA non-coding upstream 637164 13986950 ~ 13988088 (+)
G41058 NA non-coding downstream 2733 14628583 ~ 14630610 (+)
G41075 NA non-coding downstream 49215 14675065 ~ 14677245 (+)
G41082 NA non-coding downstream 64260 14690110 ~ 14690674 (+)
G41084 NA non-coding downstream 79110 14704960 ~ 14705185 (+)
G41092 NA non-coding downstream 102332 14728182 ~ 14728449 (+)
AMCG00012940 LOC107748465 other upstream 95446 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 192051 14428313 ~ 14433201 (+)
G40629 NA other upstream 2089323 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2124850 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 4083292 10540728 ~ 10541960 (+)
G41059 NA other downstream 6507 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 455569 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 672112 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 851329 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 940643 15566493 ~ 15569943 (+)

Expression


Co-expression Network