G41075


Basic Information

Item Value
gene id G41075
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14675065 ~ 14677245 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51185
TTAACTCAGCAGTAATGTTTATTCAAACAGGAAGtacataatgtaataataaaaaataaaaaaacagcagaagcTCCAGCTACACCAACGTCCTGTATTACTGCTTAAGGCAGTCTGCTGTAATAGTGGTTTGTCTGAAGTTCCCCTCCTTCTTCTCTAAATTGAATGTCTGTCTGCTAGATCTTGAAACACATCCCCAACAGCTCCTGTCACTCGATGAGAAAACAGTTGCACGCCAAGATCATAGCCTTCAAGCAACTACCTGCTGTGGAGGtacaatcaataaatattcTGGTGTACATTTTCAGGAAGGCTTGACACATTTTCTTATTAGTTATTAATCTCCAATAAGCTACATTTCAGTGTGCCAAGCGATTATTGGCATAGTGCACCCTGATGTCAGAGATCAGCCGTCTCTGCTTCAAGCAAAAAGGATGAAGAGAGTATTTTCCCTCTTCTAGATTCTATAAACTACCATAACCCTCACTCTCATACATCACAACACCTTCCTCCAGGGTTAATGGTGTGAAGCGCTTCACCACAAAGCACATCCTGCCCCCGCGCCCCAGCTGAGCATTCCCAACCACATTAATCCGCTGCCAATGAGATGAACAGCGACCCAGAGAGGATTAATGGTCTCGGCAGAACAAATGGCTACAGAACTGCGGACTTCACAGCAGTCTTCTCAAAGACCCATGACCTCAGTGCGGTGCTAAACAGACATGAATGGGTTACACTGCAGCACATTTAATGTTGTGTCACATTTGTGCTTCAGGCTTTGCTATATTGACAGTGAGTGGAATGGTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51185 True 809 lncRNA 0.43 2 14675065 14677245

Neighbor

gene id symbol gene type direction distance location
AMCG00012942 NA coding upstream 94837 14574593 ~ 14580228 (+)
AMCG00012939 LOC103459300,LOC104941780 coding upstream 164576 14479076 ~ 14510489 (+)
AMCG00012936 NA coding upstream 223962 14433803 ~ 14451103 (+)
AMCG00012935 NA coding upstream 255807 14405558 ~ 14419258 (+)
AMCG00012934 NA coding upstream 279996 14366098 ~ 14395069 (+)
AMCG00012947 NA coding downstream 103320 14780565 ~ 14793388 (+)
AMCG00012946 NA coding downstream 120467 14797712 ~ 14811683 (+)
AMCG00012945 NA coding downstream 157245 14834490 ~ 14851076 (+)
AMCG00012949 LOC108428177 coding downstream 201517 14878762 ~ 14922962 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding downstream 297465 14974710 ~ 14975822 (+)
G41058 NA non-coding upstream 44455 14628583 ~ 14630610 (+)
G41054 NA non-coding upstream 49215 14625252 ~ 14625850 (+)
G40989 NA non-coding upstream 277210 14397597 ~ 14397855 (+)
G40986 NA non-coding upstream 279166 14395576 ~ 14395899 (+)
G40963 NA non-coding upstream 330584 14340946 ~ 14344481 (+)
G41082 NA non-coding downstream 12865 14690110 ~ 14690674 (+)
G41084 NA non-coding downstream 27715 14704960 ~ 14705185 (+)
G41092 NA non-coding downstream 50937 14728182 ~ 14728449 (+)
G41096 NA non-coding downstream 58576 14735821 ~ 14736661 (+)
G41158 NA non-coding downstream 249080 14926325 ~ 14955039 (+)
G41059 NA other upstream 41652 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 145259 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 241864 14428313 ~ 14433201 (+)
G40629 NA other upstream 2139136 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2174663 12453239 ~ 12500402 (+)
AMCG00012954 NA other downstream 404174 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 620717 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 799934 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 889248 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 893661 15570906 ~ 15573468 (+)

Expression


Co-expression Network