G41138


Basic Information

Item Value
gene id G41138
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14842243 ~ 14922316 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51268
tacatgttttcattttttgtggcaAGTTAGCAGTTAAACCTTTATTATGTCTGCACATTCTTACCAAACAGTTGGTTAATATATCAAACAATTaggttttatcatttttaatacatacaaaaacactataaaatggcactctttaatactgttttgctGCAAAGTCTTTGTTTTAACATTCACATAACAAACACTGCTACAGTCTTGTCATCAGAAATTCTTCAGTCTGACCAATCACATTCCTCGGTGTTGGGTCAGGGCATGATAAGAAGTCACTGTCAGAACattcagtgtttcttttttgtgtgttgttttatattttaataaatcctTTAACAAACTGTCATACTTGTTGCTGAATCTGTAAATGTCActttacagtttcatttttatcCAGGTAAATTCCTTgtcatataaaaagaaaaatacatttcacaaaataaattaattccaaCAATATCCAGTATCCATTTAAACCTGACAGTGACCTCTGTGaaagtgacatttatttttttcaagaagATATTGGCCTGGATTAGTTTAATATGATATTCATATTCGAAAAGAAAACAAGGCATTCTGTATCTGTGTTAGCATTTTTTATCTGCCGTTTCTTTATCTCTGTGTTAATGAAGCTAGAGAAAGGATTCCCCTCCCTGCCCACTTCAGTGTAAAAAAACGTTTTTGAAATACAAGAATCGGCCAATATCAACTAAAAAagtttcactttaaaatatCCATACTACATGTTTTatctcaaaaataaacatataaaaatattaccAAAAGAGAGGGCTAGtgtgagggggagagaaagagggagagggagagagagagagagaggggggaaagAGCGACAACCAACCTTTAAGCCTAGTATGAGGTTGACCTTCCAAAAGAAATGCTCAGCAGATTCtgatttatgatttgttttttcattgtgcATATTGTAAAAGTGATCTCTACATTCATCTTCATCTACTGCAATAccttaatgctttttttaatagtatATGTTAACGTAAAGATTTGGCACATTGCTTAAAATGcaaattcctttaaaaaaatgttttgcttttttattagtGCATTTCGGGGTAGGTCCTTCCAGGTTGCATAGCGAGGGTTGTAGGTGCTGGTTAAGGTACGGTGACGTGGAAGGGGCTTCCTGGCACGTTTTCATCCCCCCATTTGACAATGAGGATGTAGTCCCCCTTTTCCTTGACTGTGTAGGTAACATTGTACATCCTGTTGCCCATGTGCTTCACGTACACTTCTTCGCAAGGCGTCTTTGGACCGTGCACTCCCACCATTAGCATGTTAGCTCTGGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51268 True 1333 lncRNA 0.36 3 14842243 14922316

Neighbor

gene id symbol gene type direction distance location
AMCG00012948 NA coding downstream 45405 14795042 ~ 14796838 (-)
AMCG00012943 socs2,LOC107590271,LOC107732999 coding downstream 69636 14757801 ~ 14772607 (-)
AMCG00012944 NA coding downstream 139641 14675085 ~ 14702602 (-)
AMCG00012937 NA coding downstream 367662 14452415 ~ 14474581 (-)
AMCG00012938 metap2 coding downstream 409087 14424811 ~ 14433156 (-)
AMCG00012955 tspan12,LOC102782178,LOC108228819 coding upstream 129647 15051963 ~ 15065613 (-)
AMCG00012956 NA coding upstream 155782 15078098 ~ 15079375 (-)
AMCG00012959 NA coding upstream 243634 15165950 ~ 15174248 (-)
AMCG00012958 NA coding upstream 253972 15176288 ~ 15212332 (-)
AMCG00012964 NA coding upstream 297017 15219333 ~ 15233107 (-)
G41102 NA non-coding downstream 105614 14733735 ~ 14736629 (-)
G41088 NA non-coding downstream 124679 14717234 ~ 14717564 (-)
G41047 NA non-coding downstream 254117 14587845 ~ 14588126 (-)
G41020 LOC107748465 non-coding downstream 312470 14528154 ~ 14529773 (-)
G41030 NA non-coding downstream 331558 14508557 ~ 14510685 (-)
G41191 NA non-coding upstream 153118 15075434 ~ 15077820 (-)
G41224 NA non-coding upstream 313304 15235620 ~ 15235862 (-)
G41243 NA non-coding upstream 314974 15237290 ~ 15278312 (-)
G41369 NA non-coding upstream 644193 15566509 ~ 15569851 (-)
G41386 NA non-coding upstream 716563 15638879 ~ 15639990 (-)
AMCG00012931 snrpf other downstream 497771 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 1726756 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 1935910 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 2570454 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 3979921 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 797197 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 1707915 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2957909 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 3007582 17929898 ~ 18046714 (-)
G41807 NA other upstream 3253745 18176061 ~ 18191522 (-)

Expression


Co-expression Network