G41158


Basic Information

Item Value
gene id G41158
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14926325 ~ 14955039 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51290
GTAAAACAGGCAGCAGCGAAAACATGACGTCCCCCCTTAACGTTTctacattaaaaagacaaaaaccgCAACTACTTTAGCAGGAAACCATCAACAACAATGATACAGTCAAAAATAACACCGCAGAGCCTCCAGAAGACAACAGTACCAGCATAGTTGCAGcaatggactggtgtcccgtccttggtgtattcctgccttgcgccctatgcctgccgggatcagctgtggcttccccacgaccctcaccaggataagcggtttcgaagatggatggatggatgtccCCACTTCTGCATATCTcagaaaacacattgaaaaaataataatttaaaagtttgaAATGGGAAAACATAGTTATGCATTTATTAGCAACATAGTTAACACTCTGAAAATGTGGTTTTATAatcaaacataattaaataaattatgtgtctCCCTAGTAAACTGCACAGATCTTGATTTTACTTCAAGATGTCttgaggaaataaaaatatcctgGGGGGCAGCTGCgtgtgtgaaatgaaaatggatGATACCTGTCATATCAGACAAGTGGTAGCCTTGTCAAGTGTGTTATATTTCTCGCTGCTGCCTTAAGACAAACAGGGAAACCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51290 True 620 lncRNA 0.41 2 14926325 14955039

Neighbor

gene id symbol gene type direction distance location
AMCG00012949 LOC108428177 coding upstream 3363 14878762 ~ 14922962 (+)
AMCG00012945 NA coding upstream 75249 14834490 ~ 14851076 (+)
AMCG00012946 NA coding upstream 114642 14797712 ~ 14811683 (+)
AMCG00012947 NA coding upstream 132937 14780565 ~ 14793388 (+)
AMCG00012941 NA coding upstream 244678 14652844 ~ 14681647 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding downstream 19671 14974710 ~ 14975822 (+)
AMCG00012951 NA coding downstream 87980 15043019 ~ 15048845 (+)
AMCG00012950 ing3,LOC106576172,LOC106609303 coding downstream 112051 15067090 ~ 15076878 (+)
AMCG00012953 NA coding downstream 190441 15145480 ~ 15151823 (+)
AMCG00012957 NA coding downstream 257949 15212988 ~ 15224513 (+)
G41096 NA non-coding upstream 189664 14735821 ~ 14736661 (+)
G41092 NA non-coding upstream 197876 14728182 ~ 14728449 (+)
G41084 NA non-coding upstream 221140 14704960 ~ 14705185 (+)
G41082 NA non-coding upstream 235651 14690110 ~ 14690674 (+)
G41075 NA non-coding upstream 249080 14675065 ~ 14677245 (+)
G41184 NA non-coding downstream 205397 15160436 ~ 15166469 (+)
G41225 NA non-coding downstream 282248 15237287 ~ 15285288 (+)
G41226 NA non-coding downstream 293339 15248378 ~ 15264573 (+)
G41230 NA non-coding downstream 330302 15285341 ~ 15287816 (+)
G41265 NA non-coding downstream 525652 15480691 ~ 15483321 (+)
G41059 NA other upstream 292912 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 396519 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 493124 14428313 ~ 14433201 (+)
G40629 NA other upstream 2390396 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2425923 12453239 ~ 12500402 (+)
AMCG00012954 NA other downstream 126380 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 342923 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 522140 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 611454 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 615867 15570906 ~ 15573468 (+)

Expression


Co-expression Network