G41226


Basic Information

Item Value
gene id G41226
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15248378 ~ 15264573 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51384
GAAAGAGACtgtgcgctgttctttatagtctgtcagatcaataggtgattggttatTGAATTTtcgagattggatttcggtttcagcccccagtgtcctattggaggggggcttgatttatgactgatgtcaatccatgccatcttttggaaatgccggttggcccgggttcgtagctctatgtcgggatttcggctctcgtccacttcaaagagtttttatcacctacaggcccctttctccagacatctcatagcagaattccaaactatttggcctcttctcggtgccatcctccccaaaactgtcactttgatgcaaaccagttccaagctgatgagctaaggaaatctgataactttgggggggagaggtcttctttagatcagtgcttcagctcagagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51384 True 406 lncRNA 0.47 2 15248378 15264573

Neighbor

gene id symbol gene type direction distance location
AMCG00012957 NA coding upstream 23865 15212988 ~ 15224513 (+)
AMCG00012953 NA coding upstream 96555 15145480 ~ 15151823 (+)
AMCG00012950 ing3,LOC106576172,LOC106609303 coding upstream 171500 15067090 ~ 15076878 (+)
AMCG00012951 NA coding upstream 199533 15043019 ~ 15048845 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding upstream 272556 14974710 ~ 14975822 (+)
AMCG00012960 NA coding downstream 10379 15274952 ~ 15279247 (+)
AMCG00012963 cog5,LOC106609192 coding downstream 156270 15420843 ~ 15475870 (+)
AMCG00012972 NA coding downstream 261461 15526034 ~ 15531609 (+)
AMCG00012974 NA coding downstream 281062 15545635 ~ 15554052 (+)
AMCG00012980 NA coding downstream 351684 15616257 ~ 15618444 (+)
G41184 NA non-coding upstream 81909 15160436 ~ 15166469 (+)
G41158 NA non-coding upstream 293339 14926325 ~ 14955039 (+)
G41096 NA non-coding upstream 511717 14735821 ~ 14736661 (+)
G41092 NA non-coding upstream 519929 14728182 ~ 14728449 (+)
G41084 NA non-coding upstream 543193 14704960 ~ 14705185 (+)
G41230 NA non-coding downstream 20768 15285341 ~ 15287816 (+)
G41265 NA non-coding downstream 216118 15480691 ~ 15483321 (+)
G41282 si:dkey-180p18.9,akr1b1,LOC107729832,LOC107690495,LOC107587162,LOC107725652 non-coding downstream 291573 15556146 ~ 15559305 (+)
G41303 NA non-coding downstream 454934 15719507 ~ 15722866 (+)
G41325 NA non-coding downstream 594491 15859064 ~ 15859370 (+)
AMCG00012954 NA other upstream 111649 15081419 ~ 15136729 (+)
G41059 NA other upstream 614965 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 718572 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 815177 14428313 ~ 14433201 (+)
G40629 NA other upstream 2712449 12488575 ~ 12535929 (+)
AMCG00012961 NA other downstream 33389 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 212606 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 301920 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 306333 15570906 ~ 15573468 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other downstream 356162 15620735 ~ 15631003 (+)

Expression


Co-expression Network