Gene
RNA
| Item | Value |
|---|---|
| gene id | G41369 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 15566509 ~ 15569851 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0022900 | electron transport chain | biological_process |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0022890 | inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
| GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
| GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51558 | True | 816 | lncRNA | 0.38 | 3 | 15566509 | 15569851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012976 | si:dkey-180p18.9,LOC107725652 | coding | downstream | 893 | 15554199 ~ 15565616 (-) |
| AMCG00012979 | ascl4 | coding | downstream | 29286 | 15536669 ~ 15537223 (-) |
| AMCG00012975 | pik3cg,LOC106609208,LOC107656384,LOC107583938,LOC107590535 | coding | downstream | 43580 | 15512472 ~ 15522929 (-) |
| AMCG00012977 | prkar2b,LOC101073002 | coding | downstream | 56987 | 15492361 ~ 15509522 (-) |
| AMCG00012969 | NA | coding | downstream | 80523 | 15477886 ~ 15485986 (-) |
| AMCG00012981 | slc13a4 | coding | upstream | 1142 | 15570993 ~ 15595338 (-) |
| AMCG00012984 | NA | coding | upstream | 156143 | 15725994 ~ 15758670 (-) |
| AMCG00012989 | NA | coding | upstream | 234106 | 15803957 ~ 15808685 (-) |
| AMCG00012995 | NA | coding | upstream | 344377 | 15914228 ~ 15924404 (-) |
| AMCG00012994 | h3f3b,LOC106912265,LOC107377396,LOC106963510 | coding | upstream | 380985 | 15950836 ~ 15955239 (-) |
| G41243 | NA | non-coding | downstream | 288197 | 15237290 ~ 15278312 (-) |
| G41224 | NA | non-coding | downstream | 330647 | 15235620 ~ 15235862 (-) |
| G41191 | NA | non-coding | downstream | 488689 | 15075434 ~ 15077820 (-) |
| G41138 | NA | non-coding | downstream | 644193 | 14842243 ~ 14922316 (-) |
| G41102 | NA | non-coding | downstream | 829880 | 14733735 ~ 14736629 (-) |
| G41386 | NA | non-coding | upstream | 69028 | 15638879 ~ 15639990 (-) |
| G41402 | NA | non-coding | upstream | 220441 | 15790292 ~ 15822009 (-) |
| G41442 | NA | non-coding | upstream | 385584 | 15955435 ~ 15956038 (-) |
| G41443 | NA | non-coding | upstream | 386248 | 15956099 ~ 15959544 (-) |
| G41444 | NA | non-coding | upstream | 389825 | 15959676 ~ 15960333 (-) |
| AMCG00012931 | snrpf | other | downstream | 1222037 | 14340416 ~ 14344472 (-) |
| G40778 | LOC107575789 | other | downstream | 2451022 | 13114893 ~ 13115487 (-) |
| AMCG00012906 | kin | other | downstream | 2660176 | 12896520 ~ 12906333 (-) |
| AMCG00012888 | mkln1,LOC107104017 | other | downstream | 3294720 | 12240396 ~ 12271789 (-) |
| AMCG00012856 | lsm8,LOC107592220,LOC107580766,LOC107656302 | other | downstream | 4704187 | 10857881 ~ 10862322 (-) |
| AMCG00012985 | NA | other | upstream | 149662 | 15719513 ~ 15722457 (-) |
| AMCG00013018 | NA | other | upstream | 1060380 | 16630231 ~ 16639087 (-) |
| AMCG00013038 | NA | other | upstream | 2310374 | 17880225 ~ 17910017 (-) |
| AMCG00013042 | NA | other | upstream | 2360047 | 17929898 ~ 18046714 (-) |
| G41807 | NA | other | upstream | 2606210 | 18176061 ~ 18191522 (-) |
