G41444


Basic Information

Item Value
gene id G41444
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15959676 ~ 15960333 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51639
CACAGTGCCACCACTATACCTTATGTCATAAACGGGGGCGCGCAGGTCCTGGGGACCGTGGGCGAAGGCGCAATGGGGGCCGTTCTTGCTGCAGTGGCCCTTAGCATCTGTCTCATGGATACAGGTGCCAGTCTTGTAGTAGCGCAGGTGGTAGCGCCTCTCAGTGTCGCCTGCTGTGCGATGCAGGAAGGGGCATCTGCAACACAAAAGGGCAAACAGGGCAGCAATCAGAGCTGAACAAATCAAACACTGAGGGGAAACGTCGTCTCGGCTTTTATTTTCTCCGCCTCAATACCAACAAGGTTTTCTACCATTCCGCTCTCTGCATTGGCTCCTGATCTCAGCTTGCATCCAGACTTTGGCTCTCATCCACTGCACCCAACTCTCCTTACACTCTCTCCAGATAACTGCGGTGttcctgcaccagaagactcTGTGTAACCCCTCACAGCTCCCCTTCCTCCACTGCCCACTCCATCTCTACCCTACCCACTGAGATCAGTTTTTTCCCTGTTTGCACTGTGGACTTGTGTGCTGCCAAAATTCTTTCCacactgcaaacacattttGGAAGCCTACATGCGTTAAGTGACAGGAGTAGCAACTGCAAATTGCAAGAGGAACAAATATTAGCAATTCACatatagaaagagaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51639 True 658 lncRNA 0.51 1 15959676 15960333

Neighbor

gene id symbol gene type direction distance location
AMCG00012994 h3f3b,LOC106912265,LOC107377396,LOC106963510 coding downstream 4437 15950836 ~ 15955239 (-)
AMCG00012995 NA coding downstream 35272 15914228 ~ 15924404 (-)
AMCG00012989 NA coding downstream 150991 15803957 ~ 15808685 (-)
AMCG00012984 NA coding downstream 201006 15725994 ~ 15758670 (-)
AMCG00012981 slc13a4 coding downstream 364338 15570993 ~ 15595338 (-)
AMCG00012999 NA coding upstream 10799 15971132 ~ 15999882 (-)
AMCG00012997 NA coding upstream 58397 16018730 ~ 16021747 (-)
AMCG00012998 NA coding upstream 77550 16037883 ~ 16074028 (-)
AMCG00013002 NA coding upstream 120928 16081261 ~ 16085241 (-)
AMCG00013004 NA coding upstream 139983 16100316 ~ 16104419 (-)
G41443 NA non-coding downstream 132 15956099 ~ 15959544 (-)
G41442 NA non-coding downstream 3638 15955435 ~ 15956038 (-)
G41402 NA non-coding downstream 137667 15790292 ~ 15822009 (-)
G41386 NA non-coding downstream 319686 15638879 ~ 15639990 (-)
G41369 NA non-coding downstream 389825 15566509 ~ 15569851 (-)
G41445 NA non-coding upstream 1024 15961357 ~ 15961841 (-)
G41448 NA non-coding upstream 5604 15965937 ~ 15966308 (-)
G41449 NA non-coding upstream 7773 15968106 ~ 15968353 (-)
G41451 NA non-coding upstream 47081 16007414 ~ 16007791 (-)
G41452 NA non-coding upstream 48609 16008942 ~ 16009394 (-)
AMCG00012985 NA other downstream 237219 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1615204 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2844189 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3053343 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3687887 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 669898 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 1919892 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1969565 17929898 ~ 18046714 (-)
G41807 NA other upstream 2215728 18176061 ~ 18191522 (-)
G41836 NA other upstream 2282417 18242750 ~ 18244093 (-)

Expression


Co-expression Network