G41453



Basic Information


Item Value
gene id G41453
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16009836 ~ 16010242 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU51649
CTCCGGCTTCAGCAGTCACAGTTCCCTTGATGTAGTTGGCCCCAAGGACTGGCTGCTTCACCTCACAGCCTTTCATCAGGTAGAAGGGCATCATGAAAGACGTCATGGAGTCCTTGCCTTTGGTCAGGAAGATGACCtacaacaaaattaatagtTAATTTGTCCTGTATTTAATTCATGTTAATCACATACCTAGTGTAGTGAATGAAGGCTGCATCCTATTTCTTCTGGTCATGAGGTGACTTTACATCTTTATAATGAGTCTGGTCTACAAAATAAGGTCATGCAGAAGGACTGCATATCACCCACAGTGAACAGCCTGAAGGATTAATGTGATTGCTTGGCCTTAAGCATAATTCAAGGCCTTGAGGGTCACAACAGGCACTGAGATTCCCCAGGCAGTGAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU51649 True 407 lncRNA 0.44 1 16009836 16010242

Neighbor


gene id symbol gene type direction distance location
AMCG00012999 NA coding downstream 9954 15971132 ~ 15999882 (-)
AMCG00012994 h3f3b,LOC106912265,LOC107377396,LOC106963510 coding downstream 54597 15950836 ~ 15955239 (-)
AMCG00012995 NA coding downstream 85432 15914228 ~ 15924404 (-)
AMCG00012989 NA coding downstream 201151 15803957 ~ 15808685 (-)
AMCG00012984 NA coding downstream 251166 15725994 ~ 15758670 (-)
AMCG00012997 NA coding upstream 8488 16018730 ~ 16021747 (-)
AMCG00012998 NA coding upstream 27641 16037883 ~ 16074028 (-)
AMCG00013002 NA coding upstream 71019 16081261 ~ 16085241 (-)
AMCG00013004 NA coding upstream 90074 16100316 ~ 16104419 (-)
AMCG00013001 NA coding upstream 98373 16108615 ~ 16128233 (-)
G41452 NA non-coding downstream 442 16008942 ~ 16009394 (-)
G41451 NA non-coding downstream 2045 16007414 ~ 16007791 (-)
G41449 NA non-coding downstream 41483 15968106 ~ 15968353 (-)
G41448 NA non-coding downstream 43528 15965937 ~ 15966308 (-)
G41445 NA non-coding downstream 47995 15961357 ~ 15961841 (-)
G41454 NA non-coding upstream 770 16011012 ~ 16011364 (-)
G41455 NA non-coding upstream 3894 16014136 ~ 16016021 (-)
G41460 NA non-coding upstream 25405 16035647 ~ 16035936 (-)
G41506 NA non-coding upstream 159067 16169309 ~ 16208177 (-)
G41510 NA non-coding upstream 207139 16217381 ~ 16217595 (-)
AMCG00012985 NA other downstream 287379 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1665364 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2894349 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3103503 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3738047 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 619989 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 1869983 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1919656 17929898 ~ 18046714 (-)
G41807 NA other upstream 2165819 18176061 ~ 18191522 (-)
G41836 NA other upstream 2232508 18242750 ~ 18244093 (-)

Expression



Co-expression Network