G41506


Basic Information

Item Value
gene id G41506
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16169309 ~ 16208177 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51713
TTCAGTTGTGTCTGGCTTTTAttgactatgagaaagcatttgattcagtCTACAGGTTCAGACATCAGTActttaagaaatcaaaacatacataaatctTATTAAGGATAAGACTCCATCAAGAccctgacaagatcaagatcttcAAAGGAGTACGTGGATTTTCTTTACAACACTTGAAGTGTTTATGagtttggactgggaagaaaaaggaattaaGATAAACAGATTATTTGAATAACTTACAATTTGCTTATGACACTTTTGCCAAAATAAGTCCTAGTTCAAAGTCAGAAACTCTCAGatgaaagtaatacaaaataactaaaaccaAAATCATGTTCAAAAGCTTTGTGAAAATCAAGAAGATTGAAGTAGATGAAAAGATActtaaatatgtacagtattctatatatatcatcatcttCCTTTGTTGATCGACTGGATTAAAACCTTTccccagatatatatatatatatatatatatacactcacctaaagaattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggaaagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattcgacctttgggacatggtgcattatcctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaattttcaggtaggccgtggcatttCAACGATGCCCAAGTGGCactaaggggcctaaagtgtgccaagaaaacatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51713 True 970 lncRNA 0.38 2 16169309 16208177

Neighbor

gene id symbol gene type direction distance location
AMCG00013003 NA coding downstream 14454 16146243 ~ 16154855 (-)
AMCG00013001 NA coding downstream 41076 16108615 ~ 16128233 (-)
AMCG00013004 NA coding downstream 64890 16100316 ~ 16104419 (-)
AMCG00013002 NA coding downstream 84068 16081261 ~ 16085241 (-)
AMCG00012998 NA coding downstream 95281 16037883 ~ 16074028 (-)
AMCG00013007 LOC108274136,LOC107754112,LOC107743783,LOC107691214,LOC107566616,LOC107568947 coding upstream 41960 16250137 ~ 16251210 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding upstream 324573 16532750 ~ 16533847 (-)
AMCG00013012 NA coding upstream 469983 16678160 ~ 16687304 (-)
AMCG00013011 NA coding upstream 508339 16716516 ~ 16718657 (-)
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding upstream 524752 16732929 ~ 16735796 (-)
G41460 NA non-coding downstream 133373 16035647 ~ 16035936 (-)
G41455 NA non-coding downstream 153288 16014136 ~ 16016021 (-)
G41454 NA non-coding downstream 157945 16011012 ~ 16011364 (-)
G41453 NA non-coding downstream 159067 16009836 ~ 16010242 (-)
G41452 NA non-coding downstream 159915 16008942 ~ 16009394 (-)
G41510 NA non-coding upstream 9204 16217381 ~ 16217595 (-)
G41518 NA non-coding upstream 125054 16333231 ~ 16333595 (-)
G41538 NA non-coding upstream 415242 16623419 ~ 16623773 (-)
G41612 NA non-coding upstream 938538 17146715 ~ 17146981 (-)
G41627 NA non-coding upstream 1093966 17302143 ~ 17302892 (-)
AMCG00012985 NA other downstream 446852 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1824837 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3053822 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3262976 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3897520 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 422054 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 1672048 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1721721 17929898 ~ 18046714 (-)
G41807 NA other upstream 1967884 18176061 ~ 18191522 (-)
G41836 NA other upstream 2034573 18242750 ~ 18244093 (-)

Expression


Co-expression Network