G41537


Basic Information

Item Value
gene id G41537
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16623420 ~ 16623650 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51751
tgtaatattgaaaaaagctctttgcattggttttagctccaagagctatgtttctttctatttccctctttgctttcctgatccctttcttaagatctctttgcagctcaacatattctatgtattttgtttcgtcaccatcccttttgtatgcgctatacaacattttcttcccctttatatttttttgcatacctctattaaaccattttggccagtgttttttgttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51751 True 231 lncRNA 0.35 1 16623420 16623650

Neighbor

gene id symbol gene type direction distance location
AMCG00013009 NA coding upstream 185559 16436064 ~ 16437861 (+)
AMCG00013006 NA coding upstream 440000 16155679 ~ 16183420 (+)
AMCG00013005 NA coding upstream 477995 16137999 ~ 16145425 (+)
AMCG00013000 NA coding upstream 594594 16022722 ~ 16028826 (+)
AMCG00012996 LOC107567801,LOC107578800,LOC107549326 coding upstream 609110 16008943 ~ 16014310 (+)
AMCG00013017 NA coding downstream 19266 16642916 ~ 16677331 (+)
AMCG00013010 NA coding downstream 84622 16708272 ~ 16710011 (+)
AMCG00013016 NA coding downstream 123520 16747170 ~ 16757092 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding downstream 845956 17469606 ~ 17476756 (+)
AMCG00013032 NA coding downstream 885637 17509287 ~ 17517737 (+)
G41536 NA non-coding upstream 39721 16583402 ~ 16583699 (+)
G41517 NA non-coding upstream 289846 16333290 ~ 16333574 (+)
G41484 NA non-coding upstream 498549 16121443 ~ 16124871 (+)
G41469 NA non-coding upstream 549321 16073514 ~ 16074099 (+)
G41325 NA non-coding upstream 764050 15859064 ~ 15859370 (+)
G41564 NA non-coding downstream 106417 16730067 ~ 16731293 (+)
G41565 NA non-coding downstream 109254 16732904 ~ 16733177 (+)
G41566 NA non-coding downstream 111712 16735362 ~ 16735848 (+)
G41577 NA non-coding downstream 149699 16773349 ~ 16776045 (+)
G41611 NA non-coding downstream 523065 17146715 ~ 17146976 (+)
G41264 hbp1,LOC108230206,LOC107701066 other upstream 805078 15477179 ~ 15818342 (+)
AMCG00012987 NA other upstream 831793 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 992417 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 1049952 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 1053477 15566493 ~ 15569943 (+)
AMCG00013015 NA other downstream 95705 16719355 ~ 16729533 (+)
AMCG00013047 NA other downstream 1535192 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 2343779 18967429 ~ 18974362 (+)
G41978 NA other downstream 2401911 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 4646025 21269675 ~ 21278728 (+)

Expression


Co-expression Network