G41566


Basic Information

Item Value
gene id G41566
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16735362 ~ 16735848 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51783
CAGTTAAGAGAAGTGTTCTGAGCTTTGGGGGCACCAAGTCTTCCCCACTGCCAGACACCTACCTCCAACGTGCAGCACAGCTGTCATGATAGAGGGCACCCACGACGTCTCGCTATTGCTAGCCTGAAAATCATTCTGCAGCTCCGTGTAAAATATGCCAATGCAGGATGGAAATGCAAGAGTCAAAGCTAGGACCAGAACGGTGGCAGTCAGCACCACCCATCCCCATCCCCCGTCCGGAGCAGGCTTCAGTCTCTGGCCAGCCCTCGACTCTGTCAGTTCCACGGCTGGGGTCTGAACCTCAGACTCCGATGGGCAGGCATTAGCTTCAGAGCCCCCATCCAGCTGCAGTGAGGGAACTCTTCTGTGGGCGCCTCCGTTTACACTCTCAGCATGTCCGCCTTGCCCAGTGTGAGGAGAGTGGCCTTTGGACATCTTCAGGTGCTGTCTGGGGGGTGTGATTCTTTTAATCAATCCCCTCCTGtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51783 True 487 lncRNA 0.56 1 16735362 16735848

Neighbor

gene id symbol gene type direction distance location
AMCG00013010 NA coding upstream 25351 16708272 ~ 16710011 (+)
AMCG00013017 NA coding upstream 58031 16642916 ~ 16677331 (+)
AMCG00013009 NA coding upstream 297501 16436064 ~ 16437861 (+)
AMCG00013006 NA coding upstream 551942 16155679 ~ 16183420 (+)
AMCG00013005 NA coding upstream 589937 16137999 ~ 16145425 (+)
AMCG00013016 NA coding downstream 11322 16747170 ~ 16757092 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding downstream 733758 17469606 ~ 17476756 (+)
AMCG00013032 NA coding downstream 773439 17509287 ~ 17517737 (+)
AMCG00013029 NA coding downstream 797997 17533845 ~ 17557349 (+)
AMCG00013031 NA coding downstream 826882 17562730 ~ 17563944 (+)
G41565 NA non-coding upstream 2185 16732904 ~ 16733177 (+)
G41564 NA non-coding upstream 4069 16730067 ~ 16731293 (+)
G41537 NA non-coding upstream 111712 16623420 ~ 16623650 (+)
G41536 NA non-coding upstream 151663 16583402 ~ 16583699 (+)
G41517 NA non-coding upstream 401788 16333290 ~ 16333574 (+)
G41577 NA non-coding downstream 37501 16773349 ~ 16776045 (+)
G41611 NA non-coding downstream 410867 17146715 ~ 17146976 (+)
G41638 NA non-coding downstream 729053 17464901 ~ 17466059 (+)
G41649 NA non-coding downstream 744731 17480579 ~ 17486682 (+)
G41683 NA non-coding downstream 841597 17577445 ~ 17577756 (+)
AMCG00013015 NA other upstream 5829 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 943735 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 1104359 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 1161894 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 1165419 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 1422994 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 2231581 18967429 ~ 18974362 (+)
G41978 NA other downstream 2289713 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 4533827 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 4550183 21286031 ~ 21471560 (+)

Expression


Co-expression Network