G41612



Basic Information


Item Value
gene id G41612
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17146715 ~ 17146981 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU51835
ggcatcaatcattacaaattcaatttaactaaaacatagcaattcaaaataatacattttacaaattccaatttacaatttacacaagtacagtaagtgaggtcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggtcacagtcaagggctacgggaaagggagcaaggaggaaaacaatcaagaacgcaagaagcataataaaaactgtgaagtgctatctagcagggataaaaggactaatattacaagtact

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU51835 True 267 lncRNA 0.36 1 17146715 17146981

Neighbor


gene id symbol gene type direction distance location
AMCG00013022 NA coding downstream 11656 17129407 ~ 17135059 (-)
AMCG00013020 NA coding downstream 167172 16922369 ~ 16979543 (-)
AMCG00013021 NA coding downstream 256764 16843833 ~ 16889951 (-)
AMCG00013019 NA coding downstream 323224 16783653 ~ 16823491 (-)
AMCG00013013 NA coding downstream 378353 16756387 ~ 16768362 (-)
AMCG00013026 spata20,LOC104963383 coding upstream 256398 17403379 ~ 17412455 (-)
AMCG00013024 NA coding upstream 267083 17414064 ~ 17462961 (-)
AMCG00013025 atp5h,LOC101487002,LOC107587968 coding upstream 317508 17464489 ~ 17468508 (-)
AMCG00013027 NA coding upstream 412780 17559761 ~ 17561006 (-)
AMCG00013028 NA coding upstream 428826 17575807 ~ 17586606 (-)
G41538 NA non-coding downstream 522942 16623419 ~ 16623773 (-)
G41518 NA non-coding downstream 813120 16333231 ~ 16333595 (-)
G41510 NA non-coding downstream 929120 16217381 ~ 16217595 (-)
G41506 NA non-coding downstream 938538 16169309 ~ 16208177 (-)
G41460 NA non-coding downstream 1110779 16035647 ~ 16035936 (-)
G41627 NA non-coding upstream 155162 17302143 ~ 17302892 (-)
G41647 NA non-coding upstream 329881 17476862 ~ 17477270 (-)
G41648 NA non-coding upstream 330834 17477815 ~ 17479389 (-)
G41655 galk1 non-coding upstream 364152 17511133 ~ 17511904 (-)
G41684 NA non-coding upstream 430457 17577438 ~ 17577756 (-)
AMCG00013018 NA other downstream 507628 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 1424258 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 2802243 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 4031228 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 4240382 12896520 ~ 12906333 (-)
AMCG00013038 NA other upstream 733244 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 782917 17929898 ~ 18046714 (-)
G41807 NA other upstream 1029080 18176061 ~ 18191522 (-)
G41836 NA other upstream 1095769 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 1111108 18258089 ~ 18264843 (-)

Expression



Co-expression Network