Gene
RNA
| Item | Value |
|---|---|
| gene id | G41627 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 17302143 ~ 17302892 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| id | description |
|---|---|
| ko05414 | Dilated cardiomyopathy |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51850 | True | 750 | lncRNA | 0.37 | 1 | 17302143 | 17302892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013022 | NA | coding | downstream | 167084 | 17129407 ~ 17135059 (-) |
| AMCG00013020 | NA | coding | downstream | 322600 | 16922369 ~ 16979543 (-) |
| AMCG00013021 | NA | coding | downstream | 412192 | 16843833 ~ 16889951 (-) |
| AMCG00013019 | NA | coding | downstream | 478652 | 16783653 ~ 16823491 (-) |
| AMCG00013013 | NA | coding | downstream | 533781 | 16756387 ~ 16768362 (-) |
| AMCG00013026 | spata20,LOC104963383 | coding | upstream | 100487 | 17403379 ~ 17412455 (-) |
| AMCG00013024 | NA | coding | upstream | 111172 | 17414064 ~ 17462961 (-) |
| AMCG00013025 | atp5h,LOC101487002,LOC107587968 | coding | upstream | 161597 | 17464489 ~ 17468508 (-) |
| AMCG00013027 | NA | coding | upstream | 256869 | 17559761 ~ 17561006 (-) |
| AMCG00013028 | NA | coding | upstream | 272915 | 17575807 ~ 17586606 (-) |
| G41612 | NA | non-coding | downstream | 155162 | 17146715 ~ 17146981 (-) |
| G41538 | NA | non-coding | downstream | 678370 | 16623419 ~ 16623773 (-) |
| G41518 | NA | non-coding | downstream | 968548 | 16333231 ~ 16333595 (-) |
| G41510 | NA | non-coding | downstream | 1084548 | 16217381 ~ 16217595 (-) |
| G41506 | NA | non-coding | downstream | 1093966 | 16169309 ~ 16208177 (-) |
| G41647 | NA | non-coding | upstream | 173970 | 17476862 ~ 17477270 (-) |
| G41648 | NA | non-coding | upstream | 174923 | 17477815 ~ 17479389 (-) |
| G41655 | galk1 | non-coding | upstream | 208241 | 17511133 ~ 17511904 (-) |
| G41684 | NA | non-coding | upstream | 274546 | 17577438 ~ 17577756 (-) |
| G41773 | NA | non-coding | upstream | 613608 | 17916500 ~ 17916939 (-) |
| AMCG00013018 | NA | other | downstream | 663056 | 16630231 ~ 16639087 (-) |
| AMCG00012985 | NA | other | downstream | 1579686 | 15719513 ~ 15722457 (-) |
| AMCG00012931 | snrpf | other | downstream | 2957671 | 14340416 ~ 14344472 (-) |
| G40778 | LOC107575789 | other | downstream | 4186656 | 13114893 ~ 13115487 (-) |
| AMCG00012906 | kin | other | downstream | 4395810 | 12896520 ~ 12906333 (-) |
| AMCG00013038 | NA | other | upstream | 577333 | 17880225 ~ 17910017 (-) |
| AMCG00013042 | NA | other | upstream | 627006 | 17929898 ~ 18046714 (-) |
| G41807 | NA | other | upstream | 873169 | 18176061 ~ 18191522 (-) |
| G41836 | NA | other | upstream | 939858 | 18242750 ~ 18244093 (-) |
| AMCG00013051 | NA | other | upstream | 955197 | 18258089 ~ 18264843 (-) |
