G41638


Basic Information

Item Value
gene id G41638
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17464901 ~ 17466059 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU51862
TGTTACTAAACAggtaatgcatatttttattcaaGGAAACAATTTTGAAGTTTCAGTTTTACGgcacagtgaaaacaaacagttttaGGTCTgtacaataacatttattttgaaacagttACATCTGgaaattagaaacaaaatccTTCCTGATGGTATATGCTCCTTGAACATTTACAACTCAGAAATGGGCTTGTTTGGCCAGTATGGGTGCTTCTCCTTGTCCAGTTTGGTTTCTGGAAAGGTTTCGTTGAGATCTTGGATGGTCATCTGGTCGAAAGGAATCATGTTCTTGAACTTCTCCAGCTTCTCATACTGAGCGATGCGAGCTTTGGAGGCCTGGATGTACGCAAGAGCGcttttattctgaaaataacagaagtgaaaacagaaaatggagACCGATTTATTTAAAGTGGTAAACAGGTAAACATGTTAACATTAAGTTCATGCCTTGAAGCCCTGGATCTCTCCAGGACTAGAGCTATTGTGCCACTGAtgttgtttattcttttatGACAGGAGACGTAACTTCGAATTACAGTTTTCAAGTGGGTTTATTCTGCTTgggcaaattaaaaatggacCACATCTATATAGGAATACATAGTCCACTTTTCAAAACTACTTACAGCCTCCTCTTCCTGAGCATTAATCTTGGAGGTTTGTGTGTCCACAGGCTCCGGGACCTTCAGAGcagaaaactaaagaaatacaaaaaataaaaataaaaatgaaacaacctTAGTCTGCCTAATTTCTTCACACACTATTTACGACATTTGCAGTATTACACCTAGGGATGGGTGGTCTACTGGTTTTACAGTTGACCATGGTTTAAACACACTACGGTATAGTGACTGTTCCAGTTGAGCTGCACCACGATAATTGTAGTTACGGTATCTACGTATATGGTATTGCACTTTGTGACATGAGCCCTACTGGTCCTGCATTGCTTTGGAAATATAACTGGATTGATAACATTGATATAACCCTGTATAATGTAATACTGATCAAGCAGTCTCCATTATTTTGGAAACTCACTGTAGACACTGGATATGCATTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51862 True 1069 lncRNA 0.38 2 17464901 17466059

Neighbor

gene id symbol gene type direction distance location
AMCG00013016 NA coding upstream 707809 16747170 ~ 16757092 (+)
AMCG00013010 NA coding upstream 754890 16708272 ~ 16710011 (+)
AMCG00013017 NA coding upstream 787570 16642916 ~ 16677331 (+)
AMCG00013009 NA coding upstream 1027040 16436064 ~ 16437861 (+)
AMCG00013006 NA coding upstream 1281481 16155679 ~ 16183420 (+)
AMCG00013023 kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 coding downstream 3547 17469606 ~ 17476756 (+)
AMCG00013032 NA coding downstream 43228 17509287 ~ 17517737 (+)
AMCG00013029 NA coding downstream 67786 17533845 ~ 17557349 (+)
AMCG00013031 NA coding downstream 96671 17562730 ~ 17563944 (+)
AMCG00013033 NA coding downstream 117066 17583125 ~ 17591701 (+)
G41611 NA non-coding upstream 317925 17146715 ~ 17146976 (+)
G41577 NA non-coding upstream 688856 16773349 ~ 16776045 (+)
G41566 NA non-coding upstream 729053 16735362 ~ 16735848 (+)
G41565 NA non-coding upstream 731724 16732904 ~ 16733177 (+)
G41564 NA non-coding upstream 733608 16730067 ~ 16731293 (+)
G41649 NA non-coding downstream 14520 17480579 ~ 17486682 (+)
G41683 NA non-coding downstream 111386 17577445 ~ 17577756 (+)
G41740 NA non-coding downstream 455111 17921170 ~ 17985309 (+)
G41743 NA non-coding downstream 463876 17929935 ~ 18013678 (+)
G41744 NA non-coding downstream 537889 18003948 ~ 18018513 (+)
AMCG00013015 NA other upstream 735368 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 1673274 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 1833898 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 1891433 15570906 ~ 15573468 (+)
AMCG00012973 NA other upstream 1894958 15566493 ~ 15569943 (+)
AMCG00013047 NA other downstream 692783 18158842 ~ 18230238 (+)
AMCG00013068 NA other downstream 1501370 18967429 ~ 18974362 (+)
G41978 NA other downstream 1559502 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3803616 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3819972 21286031 ~ 21471560 (+)

Expression


Co-expression Network