Gene
RNA
| Item | Value |
|---|---|
| gene id | G41683 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 17577445 ~ 17577756 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU51918 | True | 312 | lncRNA | 0.44 | 1 | 17577445 | 17577756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013031 | NA | coding | upstream | 13501 | 17562730 ~ 17563944 (+) |
| AMCG00013029 | NA | coding | upstream | 20096 | 17533845 ~ 17557349 (+) |
| AMCG00013032 | NA | coding | upstream | 59708 | 17509287 ~ 17517737 (+) |
| AMCG00013023 | kctd2,LOC107727321,LOC107666921,LOC107582756,LOC103398851 | coding | upstream | 100689 | 17469606 ~ 17476756 (+) |
| AMCG00013016 | NA | coding | upstream | 820353 | 16747170 ~ 16757092 (+) |
| AMCG00013033 | NA | coding | downstream | 5369 | 17583125 ~ 17591701 (+) |
| AMCG00013030 | NA | coding | downstream | 23622 | 17601378 ~ 17638696 (+) |
| AMCG00013035 | NA | coding | downstream | 79363 | 17657119 ~ 17688640 (+) |
| AMCG00013040 | NA | coding | downstream | 271000 | 17848756 ~ 17852896 (+) |
| AMCG00013041 | NA | coding | downstream | 288458 | 17866214 ~ 17889767 (+) |
| G41649 | NA | non-coding | upstream | 90763 | 17480579 ~ 17486682 (+) |
| G41638 | NA | non-coding | upstream | 111386 | 17464901 ~ 17466059 (+) |
| G41611 | NA | non-coding | upstream | 430469 | 17146715 ~ 17146976 (+) |
| G41577 | NA | non-coding | upstream | 801400 | 16773349 ~ 16776045 (+) |
| G41566 | NA | non-coding | upstream | 841597 | 16735362 ~ 16735848 (+) |
| G41740 | NA | non-coding | downstream | 343414 | 17921170 ~ 17985309 (+) |
| G41743 | NA | non-coding | downstream | 352179 | 17929935 ~ 18013678 (+) |
| G41744 | NA | non-coding | downstream | 426192 | 18003948 ~ 18018513 (+) |
| G41810 | NA | non-coding | downstream | 662236 | 18239992 ~ 18240369 (+) |
| G41812 | NA | non-coding | downstream | 662712 | 18240468 ~ 18242583 (+) |
| AMCG00013015 | NA | other | upstream | 847912 | 16719355 ~ 16729533 (+) |
| AMCG00012987 | NA | other | upstream | 1785818 | 15782364 ~ 15791627 (+) |
| AMCG00012982 | ssbp1,LOC106576077,LOC106609216 | other | upstream | 1946442 | 15620735 ~ 15631003 (+) |
| AMCG00012978 | NA | other | upstream | 2003977 | 15570906 ~ 15573468 (+) |
| AMCG00012973 | NA | other | upstream | 2007502 | 15566493 ~ 15569943 (+) |
| AMCG00013047 | NA | other | downstream | 581086 | 18158842 ~ 18230238 (+) |
| AMCG00013068 | NA | other | downstream | 1389673 | 18967429 ~ 18974362 (+) |
| G41978 | NA | other | downstream | 1447805 | 19025561 ~ 19029278 (+) |
| G42326 | LOC105030495,LOC106938339,LOC103143718,LOC103461378 | other | downstream | 3691919 | 21269675 ~ 21278728 (+) |
| AMCG00013118 | LOC106594791 | other | downstream | 3708275 | 21286031 ~ 21471560 (+) |
