G41807


Basic Information

Item Value
gene id G41807
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18176061 ~ 18191522 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52091
attgttaattattaaagaGTTATGGTAGCAACGGTGTTTCCCTCCTCCGACTGGGCGTTTATCTCACGTCGGAGCAAAGGTGACCTCGCCTCTTGAGTAGTCAGTGTTATCTAAACCTACTGATCCTACTGATATCTAAGCCCCGCTGATCATTGACATTTTGCTGtcgttttttatattttaatgatggATCTGTCCTTAAAGAAACTTTTCTTCCTCGTCGTGGTGGGAACAATGTCCTGCATTTTCTGCTATGGCTTCTTCTCCACAGAGCCGGTGCTTAAGATCATTAGGGACCGAGTTTCCCTGACTTGGTCAGCAGTTTCTTCCACAGAAAAGACAGGTGAACCAGCTCCTGTTATAAAGAACCAGGATGCTGCACAGAAAGGCCAGGAACACAAGCAGGACACACAGCCTGGCATGTTGTCACAAGCAAATGAGAAGCCCAATCATGGTCCTAATGCAAAGCTCCAAGATAACCCTCCTAAAGTGGTAACAACTTTAACTGCAAAGGACAAACCAAGTACACCAGCAAAGCCCAAACCTAAAACAACCAAAGCCTCTACTGCCTCTCCTAGGACCACCAAAGCCAAAACCACTAAAGCTGCCACAACAAcaaattccaaaaataaaccaaaaacaactgcaaacaCCATTCAGAAAGTGCTTCCTGTGCTCGTGACCCCTACACTTGTGCCGCCCATGAATAAAAATGACTTTAAGAAGATGCCAGAATGGGATTTTGAGGATATCTACCTTAGGGAACCCCAGCCAAGACAGACGGTGAGAAACCTCCcttcaatttttaaaattacacaactgtactcCATGATGGAGACAGGCACACTGCTACTTGTGCTATGTGATT

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52091 True 868 TUCP 0.44 2 18176061 18191522

Neighbor

gene id symbol gene type direction distance location
AMCG00013044 NA coding downstream 26883 18139575 ~ 18149178 (-)
AMCG00013043 NA coding downstream 67665 18089693 ~ 18108396 (-)
AMCG00013039 NA coding downstream 261535 17914090 ~ 17914526 (-)
AMCG00013037 NA coding downstream 401463 17710609 ~ 17774598 (-)
AMCG00013036 NA coding downstream 468136 17693373 ~ 17707925 (-)
AMCG00013049 NA coding upstream 2490 18194012 ~ 18239155 (-)
AMCG00013048 jmjd6,LOC107654591 coding upstream 52673 18244195 ~ 18255349 (-)
AMCG00013050 srsf2,srsf2b,LOC105012916,LOC108430244 coding upstream 73617 18265139 ~ 18265498 (-)
AMCG00013055 NA coding upstream 100648 18292170 ~ 18293312 (-)
AMCG00013063 NA coding upstream 367426 18558948 ~ 18564943 (-)
G41772 NA non-coding downstream 119349 17970304 ~ 18056712 (-)
G41773 NA non-coding downstream 259122 17916500 ~ 17916939 (-)
G41684 NA non-coding downstream 598305 17577438 ~ 17577756 (-)
G41655 galk1 non-coding downstream 664157 17511133 ~ 17511904 (-)
G41648 NA non-coding downstream 696672 17477815 ~ 17479389 (-)
G41811 NA non-coding upstream 48443 18239965 ~ 18240369 (-)
G41813 NA non-coding upstream 48946 18240468 ~ 18242535 (-)
G41839 NA non-coding upstream 67605 18259127 ~ 18259406 (-)
G41848 NA non-coding upstream 88038 18279560 ~ 18282630 (-)
G41849 NA non-coding upstream 92106 18283628 ~ 18284531 (-)
AMCG00013042 NA other downstream 129347 17929898 ~ 18046714 (-)
AMCG00013038 NA other downstream 266044 17880225 ~ 17910017 (-)
AMCG00013018 NA other downstream 1536974 16630231 ~ 16639087 (-)
AMCG00012985 NA other downstream 2453604 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 3831589 14340416 ~ 14344472 (-)
G41836 NA other upstream 51228 18242750 ~ 18244093 (-)
AMCG00013051 NA other upstream 66567 18258089 ~ 18264843 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other upstream 785538 18977060 ~ 19022778 (-)
AMCG00013070 NA other upstream 876723 19068245 ~ 19071418 (-)
G42076 NA other upstream 1788814 19980336 ~ 19982880 (-)

Expression


Co-expression Network