G41814


Basic Information

Item Value
gene id G41814
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18242783 ~ 18244143 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52107
GTGAGAAAACGTGACTTAATTCAGTCATGATCTGCACATCAACCAGTCACACCTGGGTAAAGAAGTCCACAGTTTTGGTTATTCGTATAGGAAAAGGGTTTGGCTTAAGAACTGATTTTCAGATGTGGACCAGTGTGCCTGCTGCCCTCCTGTGTAGTCAGCACTGATAACTCTGCATATTCAGTATGGTTACACACAAGCTTGTGTTCCCAAATTAATCATCATTActcagcattttaaatatgcattacaGTATTGGGAATAGAATCCCCAGTCTTCTTAATTTTAGTATTCTGAATAAAATGAGGAATGTTAAGATAGCTTTGAATCAGCAAATGAAACTAGGTTAAATTAACACCTGGCTACGAGTGGGGGTGGTGTGAACTTGTCTTTCCAACGTGATTGGCCAAAGACATCACGAACAGGTGCTCCAGATCTTCGAACCctgtaattaattcagttttgaatGACCTTTCACTTTCACATATACAGTATTGCAACTGGAAACGGAATACAATTACTACTATTGAGgcatgcatttgtattgtatagcTGGCTACAACTCTTCTAtgatacaaaactgaaatccaCCAGTTGAGATTTTTGTAACCATACCATCTCATGCATCTTAAGTGACTTTTACTTAACAATAAACTTGCATTGTGTGGCCAGAATGAGACTGGGGCAACTGTAATGTCCAACAAACATGAAGAATGTTCCCAATATGTCCCACTATAATGTATACAAGAATCACATGTGTATTCTTGTATACACATACTTCAGAATACTTATTTAGAATACTCATATCCAGAAAACTGAGGAATTCCAAATGTGCTTTGAATGGAAATGCAGGAGGATAACTGTGGACAGACGGTTGGCATTACATTGCCAAATCACCAGTGCTTTATCTGCTCAGAGGACAAGCAAACTGAATGGATGGCAGCAGTTTAGTTCAGTTACATATGAAGAAAATGTTCCAGGTCTCTGCAAAAAATATTTAGGTTCAAGCTTGCAGGATGTCTACAGAgttggtattttaaaattgctGACAATTTAGACTTAACCACTCCAAGTGCATTcaagaaaaatgctttgaaaatatttaaaaaagccaacaaacaaaaatgatatgCAAAGCAAACACTTGAAGAGAAAACTCATTGCTTGTTTATCAGCTACAATTGCATCCCTCCCTTCCAAAAAGTCATTCACAGAATTACTGATCCATCTGTAATTTTTCAATTTGCAGAGTAACTTGGCAAGTTCTGCATGGGGGCAAACCTTGCTAAATCATCCCATTTCAAATAATTGCCTaaaccaggggttttcaaaccggtcctggagtacaccctgccctgctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52107 True 1361 lncRNA 0.38 1 18242783 18244143

Neighbor

gene id symbol gene type direction distance location
AMCG00013045 NA coding upstream 88661 18151452 ~ 18154122 (+)
AMCG00013041 NA coding upstream 353016 17866214 ~ 17889767 (+)
AMCG00013040 NA coding upstream 389887 17848756 ~ 17852896 (+)
AMCG00013035 NA coding upstream 554143 17657119 ~ 17688640 (+)
AMCG00013030 NA coding upstream 604087 17601378 ~ 17638696 (+)
AMCG00013046 NA coding downstream 11302 18255445 ~ 18258332 (+)
AMCG00013053 mfsd11,mfs11 coding downstream 22125 18266268 ~ 18280801 (+)
AMCG00013052 NA coding downstream 88582 18332725 ~ 18351553 (+)
AMCG00013054 NA coding downstream 115412 18359555 ~ 18362887 (+)
AMCG00013057 NA coding downstream 144668 18388811 ~ 18396122 (+)
G41812 NA non-coding upstream 200 18240468 ~ 18242583 (+)
G41810 NA non-coding upstream 2414 18239992 ~ 18240369 (+)
G41744 NA non-coding upstream 224270 18003948 ~ 18018513 (+)
G41743 NA non-coding upstream 229105 17929935 ~ 18013678 (+)
G41740 NA non-coding upstream 257474 17921170 ~ 17985309 (+)
G41818 srsf2,srsf2b,LOC105012916,LOC108430244,LOC106612293 non-coding downstream 17820 18261963 ~ 18265695 (+)
G41821 NA non-coding downstream 39485 18283628 ~ 18284855 (+)
G41822 NA non-coding downstream 51502 18295645 ~ 18295946 (+)
G41823 LOC107575789,LOC100846954 non-coding downstream 54482 18298625 ~ 18298914 (+)
G41908 NA non-coding downstream 416111 18660254 ~ 18660522 (+)
AMCG00013047 NA other upstream 12545 18158842 ~ 18230238 (+)
AMCG00013015 NA other upstream 1513250 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 2451156 15782364 ~ 15791627 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other upstream 2611780 15620735 ~ 15631003 (+)
AMCG00012978 NA other upstream 2669315 15570906 ~ 15573468 (+)
AMCG00013068 NA other downstream 723286 18967429 ~ 18974362 (+)
G41978 NA other downstream 781418 19025561 ~ 19029278 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 3025532 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 3041888 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other downstream 3126700 21370843 ~ 21421316 (+)

Expression


Co-expression Network