G41922



Basic Information


Item Value
gene id G41922
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18660254 ~ 18660522 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU52242
gatcagccataacattatgaccactgacaggtgaagtgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcatcaaagttggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtagggtgttcccggtctgcagtggtcagtacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU52242 True 235 lncRNA 0.47 2 18660254 18660522

Neighbor


gene id symbol gene type direction distance location
AMCG00013063 NA coding downstream 95311 18558948 ~ 18564943 (-)
AMCG00013055 NA coding downstream 366942 18292170 ~ 18293312 (-)
AMCG00013050 srsf2,srsf2b,LOC105012916,LOC108430244 coding downstream 394756 18265139 ~ 18265498 (-)
AMCG00013048 jmjd6,LOC107654591 coding downstream 404905 18244195 ~ 18255349 (-)
AMCG00013049 NA coding downstream 421099 18194012 ~ 18239155 (-)
AMCG00013065 NA coding upstream 112103 18772625 ~ 18788291 (-)
AMCG00013066 grin2c,LOC105022923 coding upstream 144490 18805012 ~ 18820165 (-)
AMCG00013067 NA coding upstream 258042 18918564 ~ 18926388 (-)
AMCG00013072 NA coding upstream 303337 18963859 ~ 18964335 (-)
AMCG00013069 NA coding upstream 365050 19025572 ~ 19046046 (-)
G41875 NA non-coding downstream 226537 18429054 ~ 18433717 (-)
G41858 NA non-coding downstream 274048 18331810 ~ 18386206 (-)
G41851 NA non-coding downstream 364308 18295645 ~ 18295946 (-)
G41850 NA non-coding downstream 374258 18285551 ~ 18285996 (-)
G41849 NA non-coding downstream 375723 18283628 ~ 18284531 (-)
G41925 NA non-coding upstream 36298 18696820 ~ 18697607 (-)
G42056 NA non-coding upstream 1023914 19684436 ~ 19684658 (-)
G42058 NA non-coding upstream 1116002 19776524 ~ 19776729 (-)
G42078 NA non-coding upstream 1325721 19986243 ~ 19987735 (-)
G42136 NA non-coding upstream 1741186 20401708 ~ 20405085 (-)
AMCG00013051 NA other downstream 395411 18258089 ~ 18264843 (-)
G41836 NA other downstream 416161 18242750 ~ 18244093 (-)
G41807 NA other downstream 468732 18176061 ~ 18191522 (-)
AMCG00013042 NA other downstream 613540 17929898 ~ 18046714 (-)
AMCG00013038 NA other downstream 750237 17880225 ~ 17910017 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other upstream 316538 18977060 ~ 19022778 (-)
AMCG00013070 NA other upstream 407723 19068245 ~ 19071418 (-)
G42076 NA other upstream 1319814 19980336 ~ 19982880 (-)
AMCG00013090 NA other upstream 1870672 20531194 ~ 20545811 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 2591585 21252107 ~ 21301421 (-)

Expression



Co-expression Network