G42056


Basic Information

Item Value
gene id G42056
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 19684436 ~ 19684658 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52391
aatttcaattaaagaagtgaatttatagtatcaccttatcacgaatcctggaatcttgtagaactcaatttctgtaataattggacgcagacaccaattccaaagatataaattgtcaaatttattcaaaaacaagactaaatgtagcactacactaattatacaaaagggaaaaactaattaaaattcaactctagatcaacaaatcaaagacaaatcactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52391 True 223 lncRNA 0.28 1 19684436 19684658

Neighbor

gene id symbol gene type direction distance location
AMCG00013078 NA coding downstream 294315 19211843 ~ 19390121 (-)
AMCG00013075 LOC106589445 coding downstream 475432 19080736 ~ 19209004 (-)
AMCG00013069 NA coding downstream 638390 19025572 ~ 19046046 (-)
AMCG00013072 NA coding downstream 720101 18963859 ~ 18964335 (-)
AMCG00013067 NA coding downstream 758048 18918564 ~ 18926388 (-)
AMCG00013077 NA coding upstream 278872 19963530 ~ 19978155 (-)
AMCG00013080 LOC107684067,LOC106607505,LOC107565795,LOC107702488,LOC106600809 coding upstream 304203 19988861 ~ 20005821 (-)
AMCG00013083 NA coding upstream 684488 20369146 ~ 20372204 (-)
AMCG00013085 NA coding upstream 708996 20393654 ~ 20397861 (-)
AMCG00013084 NA coding upstream 721899 20406557 ~ 20445394 (-)
G41925 NA non-coding downstream 986829 18696820 ~ 18697607 (-)
G41922 NA non-coding downstream 1023914 18660254 ~ 18660522 (-)
G41875 NA non-coding downstream 1250719 18429054 ~ 18433717 (-)
G41858 NA non-coding downstream 1298230 18331810 ~ 18386206 (-)
G41851 NA non-coding downstream 1388490 18295645 ~ 18295946 (-)
G42058 NA non-coding upstream 91866 19776524 ~ 19776729 (-)
G42078 NA non-coding upstream 301585 19986243 ~ 19987735 (-)
G42136 NA non-coding upstream 717050 20401708 ~ 20405085 (-)
G42242 NA non-coding upstream 981687 20666345 ~ 20674228 (-)
G42278 NA non-coding upstream 1205025 20889683 ~ 20890288 (-)
AMCG00013070 NA other downstream 613018 19068245 ~ 19071418 (-)
AMCG00013071 rab37,LOC105012908,LOC106606976,LOC105901728,LOC108439461,LOC107746753,LOC107715539,LOC103393210,LOC108242943,LOC101475770,LOC108278300 other downstream 661658 18977060 ~ 19022778 (-)
AMCG00013051 NA other downstream 1419593 18258089 ~ 18264843 (-)
G41836 NA other downstream 1440343 18242750 ~ 18244093 (-)
G41807 NA other downstream 1492914 18176061 ~ 18191522 (-)
G42076 NA other upstream 295678 19980336 ~ 19982880 (-)
AMCG00013090 NA other upstream 846536 20531194 ~ 20545811 (-)
G42366 myhz2,LOC106598369,LOC104955241 other upstream 1567449 21252107 ~ 21301421 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other upstream 1615435 21300093 ~ 21311306 (-)
G42371 myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910 other upstream 1651559 21336217 ~ 21517177 (-)

Expression


Co-expression Network