G42277


Basic Information

Item Value
gene id G42277
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 20889675 ~ 20890332 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52670
tatatatatatatatatatatatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaatgccttgttgatgctagagAATGGAAAAatgttgcctggtctgatgagtctCGATTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52670 True 424 lncRNA 0.40 2 20889675 20890332

Neighbor

gene id symbol gene type direction distance location
AMCG00013101 NA coding upstream 58676 20817521 ~ 20830999 (+)
AMCG00013098 NA coding upstream 114374 20773228 ~ 20775301 (+)
AMCG00013099 NA coding upstream 121082 20760866 ~ 20768593 (+)
AMCG00013091 bsk146,LOC103373441,LOC104933992 coding upstream 239412 20641692 ~ 20650263 (+)
AMCG00013093 NA coding upstream 264377 20567147 ~ 20625298 (+)
AMCG00013100 NA coding downstream 70089 20960421 ~ 20980242 (+)
AMCG00013104 pts coding downstream 98521 20988853 ~ 20999310 (+)
AMCG00013105 NA coding downstream 139233 21029565 ~ 21075759 (+)
AMCG00013107 wu:fd14a01,LOC108254800,LOC107571573 coding downstream 295414 21185746 ~ 21216078 (+)
AMCG00013109 NA coding downstream 374858 21265190 ~ 21269791 (+)
G42269 NA non-coding upstream 49115 20839589 ~ 20840560 (+)
G42177 NA non-coding upstream 262341 20627094 ~ 20627334 (+)
G42172 NA non-coding upstream 337858 20551260 ~ 20551817 (+)
G42127 NA non-coding upstream 497066 20387684 ~ 20392609 (+)
G42077 NA non-coding upstream 901815 19986178 ~ 19987860 (+)
G42330 LOC106589491,LOC105023009,LOC103368359,LOC100710639,LOC102784652,LOC102295130 non-coding downstream 366253 21256585 ~ 21304213 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding downstream 473772 21364104 ~ 21411989 (+)
G42345 LOC777982,LOC104957706 non-coding downstream 582384 21472716 ~ 21508824 (+)
G42347 NA non-coding downstream 608641 21498973 ~ 21503924 (+)
G42350 NA non-coding downstream 638449 21528781 ~ 21600968 (+)
G41978 NA other upstream 1860397 19025561 ~ 19029278 (+)
AMCG00013068 NA other upstream 1915313 18967429 ~ 18974362 (+)
AMCG00013047 NA other upstream 2659437 18158842 ~ 18230238 (+)
AMCG00013015 NA other upstream 4160142 16719355 ~ 16729533 (+)
AMCG00012987 NA other upstream 5098048 15782364 ~ 15791627 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other downstream 379343 21269675 ~ 21278728 (+)
AMCG00013118 LOC106594791 other downstream 395699 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other downstream 480511 21370843 ~ 21421316 (+)
G42344 LOC108412647 other downstream 536328 21426660 ~ 21486808 (+)
G42453 NA other downstream 1352097 22242429 ~ 22245790 (+)

Expression


Co-expression Network