G42371 (myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910)


Basic Information

Item Value
gene id G42371
gene name myhc4,LOC108412647,LOC107723326,LOC108415768,LOC105910910
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21336217 ~ 21517177 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52819
CTCTGTGCTGTATAACCTCAAAGAGCGTTACGCAGCATGGATGATCTACACCTATTCTGGGCTGTTTTGTGCAACGGTGAATCCCTACAAGTGGCTCCCAGTGTACAATCAAGAAGTTGTGACAGCATATAGAGGCAAAAAGCGCATGGAGGCTCCACCACACATCTTCTCTGTCTCTGATAATGCCTATCAGAACATGCTCACTgatcGTGAAAACCAGTCAATCCTGATTACTGGAGAATCTGGTGCTGGAAAGACTGTGAACACGAAACGTGTCATCCAGTACTTTGCGACAATCGCAGTGTCCGGGGACAAAAAGAAGGAGACACAGCCTGGAAAAATACAGGGAACCCTGGAGGATCAAATAATCTCAGCCAACCCTCTGCTGGAGGCTTTCGGTAACGCCAAGACAGTGAGGAATGACAACTCCTCTCGCTTTGGTAAATTCATCAGAATTCACTTCGGAAGCACAGGAAAACTGGCTTCTGCTGACATTGAGACTTACTTGCTGGAGAAGTCCAGAGTAACATTCCAGCTGTCTGATGAAAGGAGCTACCACATCTTTTATCAGATCATGACCAACCACAAGCCAGAGCTCATTGACATGCTTCTGATCACCACCAATCCCTATGACTTCCCTATGATCAGCCAGGGTCAGATCTCTGTGGCCAGCATTGATGACAAAGAGGAGCTGGTTGCCACAGATacTGCCATTGATATTCTG

Function

symbol description
myhc4 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is expressed in fin; musculature system; segmental plate; and trunk. Orthologous to human MYH13 (myosin heavy chain 13).

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52819 True 724 TUCP 0.47 9 21336217 21517177

Neighbor

gene id symbol gene type direction distance location
AMCG00013113 myhz1.1,ns:zf-e68,myhz1.2,LOC108444092,LOC105902796,LOC108254796,LOC108443910,LOC103370565 coding downstream 1086 21328200 ~ 21335131 (-)
AMCG00013111 LOC100705928,LOC100710639,LOC102793686,LOC101481850,LOC108254796,LOC106589491,LOC102288653 coding downstream 47148 21287146 ~ 21289069 (-)
AMCG00013117 NA coding downstream 57555 21270349 ~ 21278662 (-)
AMCG00013114 LOC102780693,LOC101068441,LOC108261437,LOC101079795 coding downstream 72735 21248082 ~ 21263482 (-)
AMCG00013106 gas7,LOC106589492 coding downstream 239798 21079606 ~ 21096419 (-)
AMCG00013139 NA coding upstream 10096 21527273 ~ 21529046 (-)
AMCG00013143 NA coding upstream 12236 21529413 ~ 21531624 (-)
AMCG00013135 LOC107091756,LOC107691241,LOC106606941,LOC106601503,LOC105910937,LOC107559522 coding upstream 24256 21541433 ~ 21544389 (-)
AMCG00013141 NA coding upstream 28863 21546040 ~ 21549726 (-)
AMCG00013130 NA coding upstream 78898 21596075 ~ 21627396 (-)
G42372 LOC105910910,LOC103366176,LOC777984,LOC100705928 non-coding downstream 25869 21287320 ~ 21310348 (-)
G42378 LOC106596905,LOC106577420,LOC106569812 non-coding downstream 126568 21209265 ~ 21209649 (-)
G42376 myhz1.2,myhz1.1,LOC108415768,LOC102780693,LOC105899468 non-coding downstream 140867 21194149 ~ 21195350 (-)
G42278 NA non-coding downstream 445929 20889683 ~ 20890288 (-)
G42242 NA non-coding downstream 661989 20666345 ~ 20674228 (-)
G42440 dnah9 non-coding upstream 376447 21893624 ~ 21905597 (-)
G42450 NA non-coding upstream 632404 22149581 ~ 22149792 (-)
G42544 NA non-coding upstream 1057381 22574558 ~ 22574827 (-)
G42553 NA non-coding upstream 1188889 22706066 ~ 22706337 (-)
G42557 NA non-coding upstream 1298979 22816156 ~ 22816369 (-)
AMCG00013112 myhb,LOC106527115,LOC107667337,LOC107721187,LOC108440470 other downstream 24911 21300093 ~ 21311306 (-)
G42366 myhz2,LOC106598369,LOC104955241 other downstream 34796 21252107 ~ 21301421 (-)
AMCG00013090 NA other downstream 790406 20531194 ~ 20545811 (-)
G42076 NA other downstream 1353337 19980336 ~ 19982880 (-)
AMCG00013070 NA other downstream 2264799 19068245 ~ 19071418 (-)
AMCG00013184 prkar1a,LOC107708993,LOC106606198 other upstream 2309432 23826609 ~ 23839146 (-)
G42749 NA other upstream 2326906 23844083 ~ 23847477 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other upstream 3362464 24879641 ~ 24902428 (-)
AMCG00013216 NA other upstream 3508561 25025738 ~ 25029004 (-)
G43001 NA other upstream 3558216 25075393 ~ 25078244 (-)

Expression


Co-expression Network