G42449


Basic Information

Item Value
gene id G42449
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 22149585 ~ 22149787 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU52918
tccaattccaatttacacaagtacagtaagagacttcctacatcctggacggtgaaagctaagtgctgtcaagatgtagggttacagactagggctacgggaaagggagcaaggaggaaaacaatcaagaacgcgaggagcataataagctgaagtgctatctagcagggatagaggactaatattacaagtgctgtcggaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52918 True 203 lncRNA 0.45 1 22149585 22149787

Neighbor

gene id symbol gene type direction distance location
AMCG00013146 dnah9 coding upstream 237844 21773242 ~ 21911741 (+)
AMCG00013129 LOC107756562,LOC108433489,LOC107570719,LOC107695698 coding upstream 564568 21551172 ~ 21585017 (+)
AMCG00013127 NA coding upstream 602529 21545619 ~ 21547056 (+)
AMCG00013125 LOC108412647 coding upstream 662892 21486231 ~ 21486693 (+)
AMCG00013142 LOC108412647 coding upstream 662907 21486231 ~ 21486678 (+)
AMCG00013149 foxk2,LOC107719587,LOC106601484 coding downstream 126555 22276342 ~ 22292501 (+)
AMCG00013152 NA coding downstream 229448 22379235 ~ 22470187 (+)
AMCG00013154 NA coding downstream 347606 22497393 ~ 22498928 (+)
AMCG00013155 LOC108443565,LOC103481883 coding downstream 363042 22512829 ~ 22514649 (+)
AMCG00013158 NA coding downstream 499389 22649176 ~ 22655621 (+)
G42448 NA non-coding upstream 1072 22148294 ~ 22148513 (+)
G42350 NA non-coding upstream 548617 21528781 ~ 21600968 (+)
G42345 LOC777982,LOC104957706 non-coding upstream 640761 21472716 ~ 21508824 (+)
G42347 NA non-coding upstream 645661 21498973 ~ 21503924 (+)
G42331 LOC100710639,LOC102784652,LOC102295130,LOC102192639,LOC101477534,LOC108412652 non-coding upstream 737596 21364104 ~ 21411989 (+)
G42459 NA non-coding downstream 116570 22266357 ~ 22266636 (+)
G42464 wdr45b non-coding downstream 150786 22300573 ~ 22304742 (+)
G42488 NA non-coding downstream 365077 22514864 ~ 22570081 (+)
G42518 NA non-coding downstream 542145 22691932 ~ 22692216 (+)
G42554 NA non-coding downstream 712028 22861815 ~ 22862982 (+)
G42344 LOC108412647 other upstream 662777 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 678025 21286031 ~ 21471560 (+)
AMCG00013126 myhb,LOC108443910 other upstream 728269 21370843 ~ 21421316 (+)
G42326 LOC105030495,LOC106938339,LOC103143718,LOC103461378 other upstream 870857 21269675 ~ 21278728 (+)
G41978 NA other upstream 3120307 19025561 ~ 19029278 (+)
G42453 NA other downstream 92642 22242429 ~ 22245790 (+)
AMCG00013147 NA other downstream 98710 22248497 ~ 22260816 (+)
AMCG00013198 NA other downstream 2091482 24241269 ~ 24331854 (+)
G42846 NA other downstream 2597705 24747492 ~ 24749395 (+)
G42858 NA other downstream 2618637 24768424 ~ 24770148 (+)

Expression


Co-expression Network