Gene
RNA
| Item | Value |
|---|---|
| gene id | G42705 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 23784408 ~ 23831400 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU53241 | True | 535 | lncRNA | 0.42 | 2 | 23784408 | 23831400 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013175 | dcxr | coding | upstream | 43811 | 23736663 ~ 23740597 (+) |
| AMCG00013174 | rfng,LOC106610281,LOC107708990 | coding | upstream | 49104 | 23722157 ~ 23735304 (+) |
| AMCG00013179 | NA | coding | upstream | 94238 | 23688818 ~ 23690170 (+) |
| AMCG00013173 | dus1l | coding | upstream | 102583 | 23653499 ~ 23681825 (+) |
| AMCG00013172 | fasn | coding | upstream | 133255 | 23618137 ~ 23651153 (+) |
| AMCG00013180 | NA | coding | downstream | 9194 | 23840594 ~ 23847430 (+) |
| AMCG00013181 | wipi1,LOC107719990,LOC107590389,LOC107688112,LOC107721503 | coding | downstream | 17775 | 23849175 ~ 23864196 (+) |
| AMCG00013186 | NA | coding | downstream | 56184 | 23887584 ~ 23901607 (+) |
| AMCG00013188 | NA | coding | downstream | 120646 | 23952046 ~ 23961957 (+) |
| AMCG00013187 | NA | coding | downstream | 141682 | 23973082 ~ 23984425 (+) |
| G42619 | NA | non-coding | upstream | 223748 | 23554672 ~ 23560660 (+) |
| G42554 | NA | non-coding | upstream | 921426 | 22861815 ~ 22862982 (+) |
| G42518 | NA | non-coding | upstream | 1092192 | 22691932 ~ 22692216 (+) |
| G42488 | NA | non-coding | upstream | 1214327 | 22514864 ~ 22570081 (+) |
| G42464 | wdr45b | non-coding | upstream | 1479666 | 22300573 ~ 22304742 (+) |
| G42779 | sstr5,LOC104918336,LOC102219310,LOC102291375 | non-coding | downstream | 166394 | 23997794 ~ 24003887 (+) |
| G42780 | NA | non-coding | downstream | 175953 | 24007353 ~ 24007850 (+) |
| G42816 | NA | non-coding | downstream | 579442 | 24410842 ~ 24411044 (+) |
| G42845 | NA | non-coding | downstream | 914123 | 24745523 ~ 24745754 (+) |
| G42847 | rnf213,LOC107701915,LOC107556605 | non-coding | downstream | 918292 | 24749692 ~ 24750256 (+) |
| AMCG00013147 | NA | other | upstream | 1523592 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 1538618 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 2297600 | 21426660 ~ 21486808 (+) |
| AMCG00013118 | LOC106594791 | other | upstream | 2312848 | 21286031 ~ 21471560 (+) |
| AMCG00013198 | NA | other | downstream | 409869 | 24241269 ~ 24331854 (+) |
| G42846 | NA | other | downstream | 916092 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 937024 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 1681953 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 1962005 | 25793405 ~ 25798013 (+) |
